RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SLC26A3P40879 764 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NDST2P52849 883 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 INHBCP55103 352 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SH3BGRP55822 239 aaPredicted RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PSME3P61289 254 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PCSK7Q16549 785 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PTCRAQ6ISU1 281 aaPredicted RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 C14orf80Q86SX3 495 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 BBS7Q8IWZ6 715 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ZNF683Q8IZ20 524 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 UMODL1-AS1Q8N2C9 162 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TTC16Q8NEE8 873 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 BPIFB1Q8TDL5 484 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ELSPBP1Q96BH3 223 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 OTUB2Q96DC9 234 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ASB9Q96DX5 294 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NDNQ99608 321 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MPP6Q9NZW5 540 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SARDHQ9UL12 918 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 IGLV3-10A0A075B6K4 115 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NEMP2A6NFY4 417 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HEPACAM2A8MVW5 462 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 GFRA2O00451 464 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 AURKAO14965 403 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SLC7A4O43246 635 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ECI2O75521 394 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PEX11BO96011 259 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TACR2P21452 398 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SLC6A4P31645 630 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RBBP5Q15291 538 aaKnown RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 C11orf91Q3C1V1 193 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 C5orf22Q49AR2 442 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 HECTD2Q5U5R9 776 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RAP1GAP2Q684P5 730 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FBXL22Q6P050 247 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PARM1Q6UWI2 310 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 GK5Q6ZS86 529 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MTSS1LQ765P7 747 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 KDELC2Q7Z4H8 507 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CUZD1Q86UP6 607 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CPXM2Q8N436 756 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 UBXN10Q96LJ8 280 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NOL6Q9H6R4 1146 aaKnown RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SUDS3Q9H7L9 328 aaPredicted RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 COPS7BQ9H9Q2 264 aaPredicted RBP15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FAM50BQ9Y247 325 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 COMMD3-BMI1R4GMX3 469 aa15.86■□□□□ 0.13
CHRFAM7A-203ENST00000401522 DRGXA6NNA5 263 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ANHXE9PGG2 379 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 STX16-NPEPL1H3BU86 382 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PSMD12O00232 456 aaPredicted RBP15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SLC9A3R1O14745 358 aaPredicted RBP15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SCAMP3O14828 347 aaKnown RBP15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 UBDO15205 165 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CRTAMO95727 393 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CCDC166P0CW27 439 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RHOQP17081 205 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PMLP29590 882 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 GRIA2P42262 883 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TFF2Q03403 129 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FCHO2Q0JRZ9 810 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 DYNC1I2Q13409 638 aaKnown RBP15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 SPATA24Q86W54 205 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FGF14Q92915 247 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PKP2Q99959 881 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MFSD1Q9H3U5 465 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CYP4F12Q9HCS2 524 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 VCX3AQ9NNX9 186 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NT5MQ9NPB1 228 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PLK2Q9NYY3 685 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ADA2Q9NZK5 511 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CNOT11Q9UKZ1 510 aaKnown RBP15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PCDHGA7Q9Y5G6 932 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MYLKQ15746 1914 aa15.85■□□□□ 0.13
CHRFAM7A-203ENST00000401522 F5H5T6 163 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 C8BP07358 591 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MSX2P35548 267 aaPredicted RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 TNK2Q07912 1038 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PDAP1Q13442 181 aaKnown RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 FASTKQ14296 549 aaKnown RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ZNF789Q5FWF6 425 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MARC1Q5VT66 337 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 VITQ6UXI7 678 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RNF135Q8IUD6 432 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 CILP2Q8IUL8 1156 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 ADGRG2Q8IZP9 1017 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LILRA2Q8N149 483 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 RNF148Q8N7C7 305 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 OR13J1Q8NGT2 312 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 OSCP1Q8WVF1 389 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 LINC00597Q9H2U6 94 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 PRDM6Q9NQX0 595 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 THG1LQ9NWX6 298 aaKnown RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 VWA7Q9Y334 891 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 AP4B1Q9Y6B7 739 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 NYNRINQ9P2P1 1898 aaKnown RBP15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 MROH6A6NGR9 719 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 C2CD4DB7Z1M9 353 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 GPC4O75487 556 aa15.84■□□□□ 0.13
CHRFAM7A-203ENST00000401522 WISP3O95389 354 aaPredicted RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms