RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 LPCAT4Q643R3 524 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 CLEC20AQ6ZU45 233 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 BRI3BPQ8WY22 251 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 AP2M1Q96CW1 435 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 FAM83DQ9H4H8 585 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 TMEM63AO94886 807 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 EPHX1P07099 455 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 CFHP08603 1231 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 RPIAP49247 311 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 NR1H2P55055 460 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 FNDC11Q9BVV2 318 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 CLIC5Q9NZA1 410 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 GSTK1Q9Y2Q3 226 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 U3KQV3 271 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 SLC28A2O43868 658 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 PPIBP23284 216 aaKnown RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 BNIP1Q12981 228 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 NAE1Q13564 534 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF618Q5T7W0 954 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 KBTBD2Q8IY47 623 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 DEPDC4Q8N2C3 294 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 GATA5Q9BWX5 397 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 PNPLA3Q9NST1 481 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF780BQ9Y6R6 833 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 METTL18O95568 372 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 INHAP05111 366 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 IL1R2P27930 398 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 PSMD8P48556 350 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 CYP4F3Q08477 520 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 PSRC1Q6PGN9 363 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 RALGPS2Q86X27 583 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 BEND7Q8N7W2 519 aaPredicted RBP18.09■□□□□ 0.49
COL18A1-204ENST00000400337 ZNF781Q8N8C0 355 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 NIPA2Q8N8Q9 360 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 UXS1Q8NBZ7 420 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 IGSF9Q9P2J2 1179 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 FKBPLQ9UIM3 349 aa18.09■□□□□ 0.49
COL18A1-204ENST00000400337 C9IYK1 514 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 HIST1H2ABP04908 130 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 CYP4B1P13584 511 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 AQP1P29972 269 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 RPL5P46777 297 aaKnown RBP18.08■□□□□ 0.49
COL18A1-204ENST00000400337 GJA9P57773 515 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 C11orf88Q6PI97 169 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 HIST3H2AQ7L7L0 130 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 SPPL2CQ8IUH8 684 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 ENKURQ8TC29 256 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 HIST1H2ACQ93077 130 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 TWNKQ96RR1 684 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 HMG20AQ9NP66 347 aa18.08■□□□□ 0.49
COL18A1-204ENST00000400337 SSU72Q9NP77 194 aaKnown RBP18.08■□□□□ 0.49
COL18A1-204ENST00000400337 PHPT1Q9NRX4 125 aaPredicted RBP18.08■□□□□ 0.49
COL18A1-204ENST00000400337 UGT2B15P54855 530 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 TOMM20Q15388 145 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.08■□□□□ 0.486e-9■■■■■ 68.9
COL18A1-204ENST00000400337 PNPT1Q8TCS8 783 aaKnown RBP18.08■□□□□ 0.48
COL18A1-204ENST00000400337 ING5Q8WYH8 240 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 RPL10LQ96L21 214 aaKnown RBP18.08■□□□□ 0.48
COL18A1-204ENST00000400337 Q96MT0 163 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 ZNF607Q96SK3 696 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 MCMBPQ9BTE3 642 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 MRPS26Q9BYN8 205 aaKnown RBP18.08■□□□□ 0.48
COL18A1-204ENST00000400337 AKAP7Q9P0M2 348 aaPredicted RBP18.08■□□□□ 0.48
COL18A1-204ENST00000400337 CDH22Q9UJ99 828 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 AP3D1O14617 1153 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 TM7SF2O76062 418 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 APODP05090 189 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 GSTT1P30711 240 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 KIR3DL1P43629 444 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 ATP12AP54707 1039 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 LCP2Q13094 533 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 SERPINA9Q86WD7 417 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 HIPK1Q86Z02 1210 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 ZNF671Q8TAW3 534 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 MYDGFQ969H8 173 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 SLC38A2Q96QD8 506 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 WRAP53Q9BUR4 548 aaKnown RBP18.08■□□□□ 0.48
COL18A1-204ENST00000400337 TOR4AQ9NXH8 423 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 NUDT4Q9NZJ9 180 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 C9JVG2 144 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 PDE9AO76083 593 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 NFATC1O95644 943 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 ELP6Q0PNE2 266 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 IL23RQ5VWK5 629 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 METTL21CQ5VZV1 264 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 KLHL23Q8NBE8 558 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 RNF39Q9H2S5 420 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 EIF2B3Q9NR50 452 aaKnown RBP18.08■□□□□ 0.48
COL18A1-204ENST00000400337 PSMD13Q9UNM6 376 aa18.08■□□□□ 0.48
COL18A1-204ENST00000400337 NBNO60934 754 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 STX11O75558 287 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 CLDN9O95484 217 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 C4BPBP20851 252 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 AP1S1P61966 158 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 KCTD21Q4G0X4 260 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 PRR23CQ6ZRP0 262 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 FSTL5Q8N475 847 aaPredicted RBP18.07■□□□□ 0.48
COL18A1-204ENST00000400337 CPA6Q8N4T0 437 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 PPP1R14AQ96A00 147 aa18.07■□□□□ 0.48
COL18A1-204ENST00000400337 EPB41L1Q9H4G0 881 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms