RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 NKAPQ8N5F7 415 aaKnown RBP13.02□□□□□ -0.33
PRAME-201ENST00000398741 TTC9BQ8N6N2 239 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 DRAXINQ8NBI3 349 aaPredicted RBP13.02□□□□□ -0.33
PRAME-201ENST00000398741 ATAD1Q8NBU5 361 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 TMEM125Q96AQ2 219 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 VPS33AQ96AX1 596 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 ZNF599Q96NL3 588 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 NUSAP1Q9BXS6 441 aaKnown RBP13.02□□□□□ -0.33
PRAME-201ENST00000398741 TRIM8Q9BZR9 551 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 TUBA8Q9NY65 449 aaPredicted RBP13.02□□□□□ -0.33
PRAME-201ENST00000398741 OAZ3Q9UMX2 235 aa13.02□□□□□ -0.33
PRAME-201ENST00000398741 A0A1B0GTL3 188 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 TYW5A2RUC4 315 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 CCDC154A6NI56 674 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 F5H5T6 163 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CDC7O00311 574 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SNX2O60749 519 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SEC24DO94855 1032 aaPredicted RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 MLYCDO95822 493 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 ASGR1P07306 291 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 RPS17P08708 135 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 GNAO1P09471 354 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 MTHFD1P11586 935 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 CDK4P11802 303 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 TACR2P21452 398 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CTGFP29279 349 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 MAGEA11P43364 429 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CCT8P50990 548 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 LIPEQ05469 1076 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 FUT11Q495W5 492 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 TXNDC11Q6PKC3 985 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CFAP52Q8N1V2 620 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 KLHDC9Q8NEP7 349 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 TRPV3Q8NET8 790 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 OR4K2Q8NGD2 314 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CYGBQ8WWM9 190 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 GPR21Q99679 349 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CINPQ9BW66 212 aaPredicted RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 ZFYVE28Q9HCC9 887 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 C8orf4Q9NR00 106 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 AIG1Q9NVV5 245 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 HSFX1Q9UBD0 423 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SUN2Q9UH99 717 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 TDRD15B5MCY1 1934 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 KANSL1LA0AUZ9 987 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 STX16O14662 325 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 VPS26AO75436 327 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SLC22A3O75751 556 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 UROSP10746 265 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 CYBAP13498 195 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 ZNF140P52738 457 aaPredicted RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 GRIK2Q13002 908 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 DCTN2Q13561 401 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 RCAN2Q14206 197 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 AASDHQ4L235 1098 aaPredicted RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 RABL3Q5HYI8 236 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 MFSD14CQ5VZR4 134 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 LGI2Q8N0V4 545 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 OR56A4Q8NGH8 313 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SEPT8Q92599 483 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 MYEOVQ96EZ4 313 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 TRIB3Q96RU7 358 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 HGH1Q9BTY7 390 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 PDFQ9HBH1 243 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SEPT3Q9UH03 358 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 LEF1Q9UJU2 399 aaPredicted RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 PTBP2Q9UKA9 531 aaKnown RBP13.01□□□□□ -0.33
PRAME-201ENST00000398741 IKZF3Q9UKT9 509 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 SPO11Q9Y5K1 396 aa13.01□□□□□ -0.33
PRAME-201ENST00000398741 A0A0D9SEW6 157 aa13□□□□□ -0.33
PRAME-201ENST00000398741 C2orf81A6NN90 581 aa13□□□□□ -0.33
PRAME-201ENST00000398741 PFDN6O15212 129 aa13□□□□□ -0.33
PRAME-201ENST00000398741 INPPL1O15357 1258 aa13□□□□□ -0.33
PRAME-201ENST00000398741 AOC2O75106 756 aa13□□□□□ -0.33
PRAME-201ENST00000398741 EEDO75530 441 aaKnown RBP13□□□□□ -0.33
PRAME-201ENST00000398741 RASAL1O95294 804 aa13□□□□□ -0.33
PRAME-201ENST00000398741 ESRRBO95718 433 aa13□□□□□ -0.33
PRAME-201ENST00000398741 IGLV3-27P01718 113 aa13□□□□□ -0.33
PRAME-201ENST00000398741 NCK1P16333 377 aa13□□□□□ -0.33
PRAME-201ENST00000398741 RPL10P27635 214 aaKnown RBP13□□□□□ -0.33
PRAME-201ENST00000398741 SOX11P35716 441 aa13□□□□□ -0.33
PRAME-201ENST00000398741 RANBP1P43487 201 aa13□□□□□ -0.33
PRAME-201ENST00000398741 SCNN1BP51168 640 aa13□□□□□ -0.33
PRAME-201ENST00000398741 APLP1P51693 650 aa13□□□□□ -0.33
PRAME-201ENST00000398741 YBX1P67809 324 aaKnown RBP13□□□□□ -0.33
PRAME-201ENST00000398741 PTPRNQ16849 979 aa13□□□□□ -0.33
PRAME-201ENST00000398741 SLC36A3Q495N2 470 aa13□□□□□ -0.33
PRAME-201ENST00000398741 NADSYN1Q6IA69 706 aa13□□□□□ -0.33
PRAME-201ENST00000398741 SYVN1Q86TM6 617 aa13□□□□□ -0.33
PRAME-201ENST00000398741 CLVS1Q8IUQ0 354 aaPredicted RBP13□□□□□ -0.33
PRAME-201ENST00000398741 FUBP1Q96AE4 644 aaKnown RBP13□□□□□ -0.33
PRAME-201ENST00000398741 SEPT5Q99719 369 aaPredicted RBP13□□□□□ -0.33
PRAME-201ENST00000398741 SPON2Q9BUD6 331 aa13□□□□□ -0.33
PRAME-201ENST00000398741 LIN28AQ9H9Z2 209 aaKnown RBP13□□□□□ -0.33
PRAME-201ENST00000398741 SLC52A3Q9NQ40 469 aa13□□□□□ -0.33
PRAME-201ENST00000398741 RIC8BQ9NVN3 520 aa13□□□□□ -0.33
PRAME-201ENST00000398741 IL37Q9NZH6 218 aa13□□□□□ -0.33
PRAME-201ENST00000398741 TRMT6Q9UJA5 497 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms