RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 FUBP3Q96I24 572 aaKnown RBP eCLIP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 MS4A4AQ96JQ5 239 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 COQ7Q99807 217 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 MRPL57Q9BQC6 102 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 RACGAP1Q9H0H5 632 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 LMAN2LQ9H0V9 348 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 XPR1Q9UBH6 696 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 LEF1Q9UJU2 399 aaPredicted RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 STX11O75558 287 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NT5EP21589 574 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 MANFP55145 182 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 ILF3Q12906 894 aaKnown RBP eCLIP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NDUFA9Q16795 377 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 DNAJB7Q7Z6W7 309 aaPredicted RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 PEG10Q86TG7 708 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 C10orf107Q8IVU9 208 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 C5orf34Q96MH7 638 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 XPNPEP1Q9NQW7 623 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 KCNE2Q9Y6J6 123 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 hCG_1818297A0A087WSY0 165 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 H3BNH8 94 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CDK14O94921 469 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 C4BPAP04003 597 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 SOD2P04179 222 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 COX4I1P13073 169 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 SLC10A6Q3KNW5 377 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CFAP206Q8IYR0 622 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 TTC29Q8NA56 475 aaPredicted RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CDADC1Q9BWV3 514 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 AGO3Q9H9G7 860 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NMUR1Q9HB89 426 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 HNMTP50135 292 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NOMO3P69849 1222 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 VANGL1Q8TAA9 524 aaPredicted RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 JOSD2Q8TAC2 188 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 SH3RF2Q8TEC5 729 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 PPCDCQ96CD2 204 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NARS2Q96I59 477 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 GAL3ST4Q96RP7 486 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NUAK2Q9H093 628 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CRISPLD1Q9H336 500 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 EPB41L1Q9H4G0 881 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 FAM124BQ9H5Z6 455 aaPredicted RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 NID2Q14112 1375 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 MYADML2A6NDP7 307 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 WNT7AO00755 349 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 RFXANKO14593 260 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 ASNA1O43681 348 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CYP4B1P13584 511 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 EPHA3P29320 983 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 HOXC12P31275 282 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 RCVRNP35243 200 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CDH13P55290 713 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 WNT3AP56704 352 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 ZNF155Q12901 538 aaPredicted RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 ADAMTSL2Q86TH1 951 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 RTL3Q8N8U3 475 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 PNPT1Q8TCS8 783 aaKnown RBP14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 CD101Q93033 1021 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 SNX15Q9NRS6 342 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 PHF24Q9UPV7 400 aa14.17□□□□□ -0.14
PCDHA11-201ENST00000398640 E9PAM4 449 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 CST1P01037 141 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 ITGAVP06756 1048 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 LCLAT1Q6UWP7 414 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 SETD7Q8WTS6 366 aaKnown RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 LPIN3Q9BQK8 851 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 DPEP3Q9H4B8 488 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 CMTM6Q9NX76 183 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 CNMDO75829 334 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 UGT2B15P54855 530 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 CHSY3Q70JA7 882 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 SERINC5Q86VE9 423 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 FBXO15Q8NCQ5 510 aaPredicted RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 SHC3Q92529 594 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 ZBED3Q96IU2 234 aaPredicted RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 FBXL18Q96ME1 805 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 ARHGAP9Q9BRR9 750 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 SFXN1Q9H9B4 322 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 RAI2Q9Y5P3 530 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 SLC25A52Q3SY17 297 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 GRASPQ7Z6J2 395 aaPredicted RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 GPR180Q86V85 440 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 PHF13Q86YI8 300 aaPredicted RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 ZNF398Q8TD17 642 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 WFIKKN2Q8TEU8 576 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 PGM2Q96G03 612 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 HNRNPABQ99729 332 aaKnown RBP14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 ABI3Q9P2A4 366 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 UBR2Q8IWV8 1755 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 TIPRLO75663 272 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 AP2M1Q96CW1 435 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 KCNN2Q9H2S1 579 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 PRKCIP41743 596 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 INAVAQ3KP66 663 aa14.16□□□□□ -0.14
PCDHA11-201ENST00000398640 KBTBD2Q8IY47 623 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms