RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 TAS2R39P59534 338 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 PLA2G4EQ3MJ16 856 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 CAPN13Q6MZZ7 669 aaPredicted RBP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 AMZ2Q86W34 360 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TMPRSS6Q8IU80 811 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 RELL1Q8IUW5 271 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 SELENOMQ8WWX9 145 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 SORCS1Q8WY21 1168 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 FAM3CQ92520 227 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 GLMNQ92990 594 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 OR2AG1Q9H205 316 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A7Q9HAW7 530 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A10Q9HAW8 530 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 UGT1A8Q9HAW9 530 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ANGPTL2Q9UKU9 493 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 BRCA1P38398 1863 aaKnown RBP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 A0A0J9YYE9 177 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 FAM159BA6NKW6 160 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ISM1B1AKI9 464 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 B2RBV5 119 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 C5orf58C9J3I9 102 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TSPAN6O43657 245 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 VIPP01282 170 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 TRBC1P01850 177 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 SRCP12931 536 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ARSAP15289 507 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 GKP32189 559 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ACSM2AQ08AH3 577 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 USP39Q53GS9 565 aaKnown RBP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 ACSM2BQ68CK6 577 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 IL27RAQ6UWB1 636 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 FNDC5Q8NAU1 212 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 KHSRPQ92945 711 aaKnown RBP eCLIP8.22□□□□□ -1.09
PTPRD-204ENST00000397606 NXNL1Q96CM4 212 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 MGME1Q9BQP7 344 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 COG4Q9H9E3 785 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 KLQ9UEF7 1012 aa8.22□□□□□ -1.09
PTPRD-204ENST00000397606 PRRC2BQ5JSZ5 2229 aaKnown RBP8.21□□□□□ -1.09
PTPRD-204ENST00000397606 K7ERQ8 282 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 ULK1O75385 1050 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 SEC22BO75396 215 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 SERPINB5P36952 375 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 BST1Q10588 318 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 SNCBQ16143 134 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 NCEH1Q6PIU2 408 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 GPRIN3Q6ZVF9 776 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 TAF8Q7Z7C8 310 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 NPAS3Q8IXF0 933 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 TP53INP2Q8IXH6 220 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 AGGF1Q8N302 714 aaeCLIP8.21□□□□□ -1.09
PTPRD-204ENST00000397606 CNDP1Q96KN2 507 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 HERPUD2Q9BSE4 406 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 EFCAB1Q9HAE3 211 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 MIEF1Q9NQG6 463 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 NLE1Q9NVX2 485 aaPredicted RBP8.21□□□□□ -1.09
PTPRD-204ENST00000397606 RAP2CQ9Y3L5 183 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 MYH10P35580 1976 aa8.21□□□□□ -1.09
PTPRD-204ENST00000397606 NPEPPSL1A6NEC2 478 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 OR51F1A6NGY5 319 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 IPO13O94829 963 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 WDR47O94967 919 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 CCNDBP1O95273 360 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 MT-CO1P00395 513 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 CYP17A1P05093 508 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 C8GP07360 202 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 BPGMP07738 259 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 EEF1DP29692 281 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 RPIAP49247 311 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ANXA11P50995 505 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ARHGDIAP52565 204 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 RASA2Q15283 850 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 CHST15Q7LFX5 561 aaPredicted RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ZNF438Q7Z4V0 828 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 CAND1Q86VP6 1230 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 RNF217Q8TC41 542 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ISG20Q96AZ6 181 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 TRIT1Q9H3H1 467 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 NUDT4Q9NZJ9 180 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 STON1Q9Y6Q2 735 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 PSMD12O00232 456 aaPredicted RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 DYRK3O43781 588 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 GUCY1B2O75343 617 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 OLIG2Q13516 323 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 TP53BP2Q13625 1128 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 MSS51Q4VC12 460 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 LIMS2Q7Z4I7 341 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 HID1Q8IV36 788 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 CPNE9Q8IYJ1 553 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 STARD8Q92502 1023 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 SEC14L1Q92503 715 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 SLC22A12Q96S37 553 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 DPY30Q9C005 99 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 KCNK4Q9NYG8 393 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 CASP8AP2Q9UKL3 1982 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 ZNFX1Q9P2E3 1918 aaKnown RBP8.21□□□□□ -1.1
PTPRD-204ENST00000397606 SGTAO43765 313 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 GPC1P35052 558 aa8.21□□□□□ -1.1
PTPRD-204ENST00000397606 NIPAL4Q0D2K0 466 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms