RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 APLFQ8IW19 511 aaPredicted RBP16.44■□□□□ 0.22
TRIM39-205ENST00000396551 ICA1LQ8NDH6 482 aa16.44■□□□□ 0.22
TRIM39-205ENST00000396551 AUTS2Q8WXX7 1259 aa16.44■□□□□ 0.22
TRIM39-205ENST00000396551 ATP6V1E2Q96A05 226 aa16.44■□□□□ 0.22
TRIM39-205ENST00000396551 CCDC97Q96F63 343 aaPredicted RBP16.44■□□□□ 0.22
TRIM39-205ENST00000396551 ASB1Q9Y576 335 aa16.44■□□□□ 0.22
TRIM39-205ENST00000396551 TIMM22Q9Y584 194 aa16.44■□□□□ 0.22
TRIM39-205ENST00000396551 PCDHB9Q9Y5E1 797 aa16.44■□□□□ 0.22
TRIM39-205ENST00000396551 CSKP41240 450 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 RHOAP61586 193 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 FOLH1Q04609 750 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 IL23RQ5VWK5 629 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 TMEM102Q8N9M5 508 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 ZNF483Q8TF39 744 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 ESAMQ96AP7 390 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 LINGO1Q96FE5 620 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 DEFB118Q96PH6 123 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 C1QTNF3Q9BXJ4 246 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 IL17CQ9P0M4 197 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 MAP10Q9P2G4 905 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 DNMT3BQ9UBC3 853 aaKnown RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 TRMT6Q9UJA5 497 aaKnown RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 PCTPQ9UKL6 214 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 SCN8AQ9UQD0 1980 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 IQCF5A8MTL0 148 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 C9JVG2 144 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 K7ERQ8 282 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 DNAJA2O60884 412 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 CAPNS1P04632 268 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 C8BP07358 591 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 PIM1P11309 404 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 CD9P21926 228 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 CLCN4P51793 760 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 INO80DQ53TQ3 878 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 C6orf10Q5SRN2 563 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 SYVN1Q86TM6 617 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 TMEM126BQ8IUX1 230 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 CPNE9Q8IYJ1 553 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 PDP2Q9P2J9 529 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 VPS9D1Q9Y2B5 631 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 ZNF711Q9Y462 761 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 SYCE1LA8MT33 242 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 NR5A2O00482 541 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 STX16O14662 325 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 FKTNO75072 461 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 CTPS1P17812 591 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 CAPN3P20807 821 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 VEPH1Q14D04 833 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 SPOUT1Q5T280 376 aaKnown RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 ARL14EPQ8N8R7 260 aaPredicted RBP16.43■□□□□ 0.22
TRIM39-205ENST00000396551 BHMTQ93088 406 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 TUBGCP3Q96CW5 907 aa16.43■□□□□ 0.22
TRIM39-205ENST00000396551 KIF1CO43896 1103 aaKnown RBP16.42■□□□□ 0.22
TRIM39-205ENST00000396551 ALPIP09923 528 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 CA5AP35218 305 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 RPL26P61254 145 aaKnown RBP16.42■□□□□ 0.22
TRIM39-205ENST00000396551 PITRM1Q5JRX3 1037 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 RARS2Q5T160 578 aaKnown RBP16.42■□□□□ 0.22
TRIM39-205ENST00000396551 Q6ZNB5 142 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 LYSMD3Q7Z3D4 306 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 SLC39A11Q8N1S5 342 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 P2RY12Q9H244 342 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 TXNDC9O14530 226 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 PRRG1O14668 218 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 HGFP14210 728 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 LBPP18428 481 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 SLC7A2P52569 658 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 RAB33AQ14088 237 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 TLR1Q15399 786 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 TAS2R42Q7RTR8 314 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 KCNJ9Q92806 393 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 PLEKHG4BQ96PX9 1271 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 GPATCH1Q9BRR8 931 aaKnown RBP16.42■□□□□ 0.22
TRIM39-205ENST00000396551 IL21Q9HBE4 155 aa16.42■□□□□ 0.22
TRIM39-205ENST00000396551 MRPL40Q9NQ50 206 aaKnown RBP16.42■□□□□ 0.22
TRIM39-205ENST00000396551 CHRM3P20309 590 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 PDK3Q15120 406 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 VPS26BQ4G0F5 336 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 TXNDC8Q6A555 127 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 APCDD1Q8J025 514 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 MIER2Q8N344 545 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 HJURPQ8NCD3 748 aaPredicted RBP16.41■□□□□ 0.22
TRIM39-205ENST00000396551 ADCY4Q8NFM4 1077 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 OR6K2Q8NGY2 324 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 NAT14Q8WUY8 206 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 TOP1MTQ969P6 601 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 SLCO4A1Q96BD0 722 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 TM6SF2Q9BZW4 377 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 SARS2Q9NP81 518 aaKnown RBP16.41■□□□□ 0.22
TRIM39-205ENST00000396551 SLC52A3Q9NQ40 469 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
TRIM39-205ENST00000396551 HACD3Q9P035 362 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 KIAA1671Q9BY89 1806 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 LATS1O95835 1130 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 PRR35P0CG20 571 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 PPP3CCP48454 512 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 CLCN7P51798 805 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 IL2P60568 153 aa16.41■□□□□ 0.22
TRIM39-205ENST00000396551 YBX1P67809 324 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms