RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 KATNAL2Q8IYT4 538 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 SFRP1Q8N474 314 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 CCDC97Q96F63 343 aaPredicted RBP18.12■□□□□ 0.49
FXN-203ENST00000396366 CCDC74BQ96LY2 380 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 HEMGNQ9BXL5 484 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 GPR63Q9BZJ6 419 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 OR2AG1Q9H205 316 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 KCNK4Q9NYG8 393 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 FOXJ2Q9P0K8 574 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 CFAP46Q8IYW2 2715 aa18.12■□□□□ 0.49
FXN-203ENST00000396366 GCN1Q92616 2671 aaKnown RBP18.11■□□□□ 0.49
FXN-203ENST00000396366 SOWAHDA6NJG2 315 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 C9orf172C9J069 976 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 GRID2O43424 1007 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 NUAK1O60285 661 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 SNX2O60749 519 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 C1QL1O75973 258 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 NDST3O95803 873 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 BPIP17213 487 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 ZNF75DP51815 510 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 PEX6Q13608 980 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 SPA17Q15506 151 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 TFDP3Q5H9I0 405 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 KDELC1Q6UW63 502 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 BZW1Q7L1Q6 419 aaKnown RBP18.11■□□□□ 0.49
FXN-203ENST00000396366 ZFAND4Q86XD8 727 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 CCDC50Q8IVM0 306 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 CCDC170Q8IYT3 715 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 RCOR2Q8IZ40 523 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 P3H4Q92791 437 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 CMKLR1Q99788 373 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 HERPUD2Q9BSE4 406 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 BPIFA1Q9NP55 256 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.11■□□□□ 0.49
FXN-203ENST00000396366 DUSP10Q9Y6W6 482 aa18.11■□□□□ 0.49
FXN-203ENST00000396366 NVLO15381 856 aaKnown RBP18.1■□□□□ 0.49
FXN-203ENST00000396366 MTX2O75431 263 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 SLC25A14O95258 325 aaPredicted RBP18.1■□□□□ 0.49
FXN-203ENST00000396366 CHRNA4P43681 627 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 LIMK2P53671 638 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 WNT3AP56704 352 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 NFATC2Q13469 925 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 SLC14A2Q15849 920 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 ZNF569Q5MCW4 686 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.1■□□□□ 0.49
FXN-203ENST00000396366 IYDQ6PHW0 289 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 CCDC81Q6ZN84 652 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 ADGRG6Q86SQ4 1221 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 ZNF567Q8N184 647 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 SLC25A41Q8N5S1 370 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 PMEPA1Q969W9 287 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 TMEM159Q96B96 161 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 OXNAD1Q96HP4 312 aaPredicted RBP18.1■□□□□ 0.49
FXN-203ENST00000396366 SLC38A3Q99624 504 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 ANP32EQ9BTT0 268 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 RMI1Q9H9A7 625 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 PRDM8Q9NQV8 689 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 SLC23A2Q9UGH3 650 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 TMPRSS11EQ9UL52 423 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 REXO2Q9Y3B8 237 aaKnown RBP18.1■□□□□ 0.49
FXN-203ENST00000396366 ADGRG1Q9Y653 693 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 EPN1Q9Y6I3 576 aaPredicted RBP18.1■□□□□ 0.49
FXN-203ENST00000396366 AHCTF1Q8WYP5 2266 aa18.1■□□□□ 0.49
FXN-203ENST00000396366 LOC285095A0A1B0GVY8 99 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 A6NCN8 305 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 K7ENP7 123 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 FASLGP48023 281 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 SQSTM1Q13501 440 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 PLA2G4EQ3MJ16 856 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 KHDC1Q4VXA5 237 aaKnown RBP18.09■□□□□ 0.49
FXN-203ENST00000396366 SIRPB2Q5JXA9 342 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 KIAA1614Q5VZ46 1190 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 CCDC70Q6NSX1 233 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 C11orf63Q6NUN7 778 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 INO80CQ6PI98 192 aaPredicted RBP18.09■□□□□ 0.49
FXN-203ENST00000396366 CRTC3Q6UUV7 619 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 PID1Q7Z2X4 250 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 DAAM2Q86T65 1068 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 TRAM1L1Q8N609 369 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 GLYATL1Q969I3 302 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 MRGPRX2Q96LB1 330 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 CCNL2Q96S94 520 aaPredicted RBP18.09■□□□□ 0.49
FXN-203ENST00000396366 ZSCAN5AQ9BUG6 496 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 CARD9Q9H257 536 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 TRIM39Q9HCM9 518 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 KLC4Q9NSK0 619 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 KLHL8Q9P2G9 620 aaPredicted RBP18.09■□□□□ 0.49
FXN-203ENST00000396366 FAM153AQ9UHL3 310 aa18.09■□□□□ 0.49
FXN-203ENST00000396366 ZW10O43264 779 aa18.08■□□□□ 0.48
FXN-203ENST00000396366 NDUFA10O95299 355 aa18.08■□□□□ 0.48
FXN-203ENST00000396366 FGF3P11487 239 aaPredicted RBP18.08■□□□□ 0.48
FXN-203ENST00000396366 CYLC1P35663 651 aaPredicted RBP18.08■□□□□ 0.48
FXN-203ENST00000396366 PPM1FP49593 454 aaPredicted RBP18.08■□□□□ 0.48
FXN-203ENST00000396366 DCDC1P59894 354 aa18.08■□□□□ 0.48
FXN-203ENST00000396366 RAD9BQ6WBX8 426 aa18.08■□□□□ 0.48
FXN-203ENST00000396366 OR4D9Q8NGE8 314 aa18.08■□□□□ 0.48
FXN-203ENST00000396366 SNRNP27Q8WVK2 155 aaKnown RBP18.08■□□□□ 0.48
FXN-203ENST00000396366 HTR3CQ8WXA8 447 aa18.08■□□□□ 0.48
FXN-203ENST00000396366 QKIQ96PU8 341 aaKnown RBP eCLIP18.08■□□□□ 0.486e-6■■■■□ 23.1
FXN-203ENST00000396366 PANX2Q96RD6 677 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms