RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 PLD4Q96BZ4 506 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CPXM1Q96SM3 734 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 NOL6Q9H6R4 1146 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 FETUBQ9UGM5 382 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 EGFL7Q9UHF1 273 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 BTRCQ9Y297 605 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PIK3C2AO00443 1686 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TAF4O00268 1085 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TRBC1P01850 177 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 IL12AP29459 219 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ERVK-21P61565 698 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 FOLH1Q04609 750 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RIPK1Q13546 671 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SULT1C3Q6IMI6 304 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CHADLQ6NUI6 762 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CNTD1Q8N815 330 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 OR2T12Q8NG77 320 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 METTL21AQ8WXB1 218 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ROPN1LQ96C74 230 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SLC25A51Q9H1U9 297 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CMTM6Q9NX76 183 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RBM7Q9Y580 266 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ELOVL7A1L3X0 281 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ABLIM1O14639 778 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 FPGTO14772 594 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 INSIG1O15503 277 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 BUD23O43709 281 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 STK16O75716 305 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CST3P01034 146 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 VIPP01282 170 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 C8GP07360 202 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 BPGMP07738 259 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SAGP10523 405 aaPredicted RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PRKAR2AP13861 404 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 SELPP16109 830 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 FLT3LGP49771 235 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TAS2R40P59535 323 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 POU5F1Q01860 360 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 QPRTQ15274 297 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 PTPN20Q4JDL3 420 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 LDLRAP1Q5SW96 308 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HECTD2Q5U5R9 776 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 LOXHD1Q8IVV2 1947 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TMEM192Q8IY95 271 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 NAT16Q8N8M0 369 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 AGAP11Q8TF27 550 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 RCN3Q96D15 328 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 CRELD1Q96HD1 420 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ABCG4Q9H172 646 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 ALG2Q9H553 416 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 INTS10Q9NVR2 710 aaKnown RBP5.43□□□□□ -1.54
VPS13C-204ENST00000395898 TOR4AQ9NXH8 423 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 HEBP2Q9Y5Z4 205 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 MRC1P22897 1456 aa5.43□□□□□ -1.54
VPS13C-204ENST00000395898 EDF1O60869 148 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PIRTP0C851 137 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CDKN2BP42772 138 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ZNF846Q147U1 533 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CFAP206Q8IYR0 622 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 AHI1Q8N157 1196 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OR4K2Q8NGD2 314 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TLE6Q9H808 572 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 COPS7AQ9UBW8 275 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TMEM88BA6NKF7 163 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ADAMDEC1O15204 470 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 MTRF1O75570 445 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LRATO95237 230 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GPIP06744 558 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CCT3P49368 545 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 STARP49675 285 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DLG1Q12959 904 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TRIM32Q13049 653 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GPR158Q5T848 1215 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 RHBDF2Q6PJF5 856 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ADGRD1Q6QNK2 874 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LBX2Q6XYB7 198 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CUZD1Q86UP6 607 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 GLB1L3Q8NCI6 653 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 FBXO22Q8NEZ5 403 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 OR10G6Q8NH81 332 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 EFHD2Q96C19 240 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ELL3Q9HB65 397 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 RNF19AQ9NV58 838 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 RAB26Q9ULW5 256 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PADI3Q9ULW8 664 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 NAV1Q8NEY1 1877 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 DUOX1Q9NRD9 1551 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CBFA2T3O75081 653 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 HADHBP55084 474 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 LILRA4P59901 499 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SRP54P61011 504 aaKnown RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 TMEM63BQ5T3F8 832 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 BEND5Q7L4P6 421 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SAMD14Q8IZD0 417 aaPredicted RBP5.42□□□□□ -1.54
VPS13C-204ENST00000395898 CERS5Q8N5B7 392 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PIH1D2Q8WWB5 315 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 PCED1BQ96HM7 432 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 RAI2Q9Y5P3 530 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 ARL5CA6NH57 179 aa5.42□□□□□ -1.54
VPS13C-204ENST00000395898 SAGE2PA6NJ88 616 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms