RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 SMOXQ9NWM0 555 aa24.08■■□□□ 1.45
LRFN4-202ENST00000393952 VPS9D1Q9Y2B5 631 aa24.08■■□□□ 1.45
LRFN4-202ENST00000393952 FAM95CA0A1B0GW59 222 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 TMEM221A6NGB7 291 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 LRRC72A6NJI9 287 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 M0R296 226 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 PFDN6O15212 129 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 SEMA4FO95754 770 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 PAK4O96013 591 aaPredicted RBP24.08■■□□□ 1.44
LRFN4-202ENST00000393952 MT-ND3P03897 115 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 AOC1P19801 751 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 MAGOHP61326 146 aaKnown RBP24.08■■□□□ 1.44
LRFN4-202ENST00000393952 SGCGQ13326 291 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 AGERQ15109 404 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 GPRC6AQ5T6X5 926 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 RAET1GQ6H3X3 334 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 SLC41A1Q8IVJ1 513 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 SRRM1Q8IYB3 904 aaKnown RBP24.08■■□□□ 1.44
LRFN4-202ENST00000393952 PLA2G15Q8NCC3 412 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 RLN3Q8WXF3 142 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 ELMO2Q96JJ3 720 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 TTC1Q99614 292 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 SLC17A9Q9BYT1 436 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 CAB39LQ9H9S4 337 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 SLC39A10Q9ULF5 831 aa24.08■■□□□ 1.44
LRFN4-202ENST00000393952 HMGB1P1B2RPK0 211 aaPredicted RBP24.07■■□□□ 1.44
LRFN4-202ENST00000393952 FMO4P31512 558 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 PPARGP37231 505 aaPredicted RBP24.07■■□□□ 1.44
LRFN4-202ENST00000393952 PTGER3P43115 390 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 GPR1P46091 355 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 CCR3P51677 355 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 MAP7D1Q3KQU3 841 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 EXOC3L1Q86VI1 746 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 NLRP8Q86W28 1048 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 CAMKK1Q8N5S9 505 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 TOE1Q96GM8 510 aaKnown RBP24.07■■□□□ 1.44
LRFN4-202ENST00000393952 KLF6Q99612 283 aaPredicted RBP24.07■■□□□ 1.44
LRFN4-202ENST00000393952 KCTD5Q9NXV2 234 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 ZDHHC3Q9NYG2 299 aa24.07■■□□□ 1.44
LRFN4-202ENST00000393952 K7ESF4 209 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 INPP4BO15327 924 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 ZNF217O75362 1048 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 RFPL1O75677 317 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 ALDOAP04075 364 aaKnown RBP24.06■■□□□ 1.44
LRFN4-202ENST00000393952 PCCBP05166 539 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 SAT1P21673 171 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 OXTRP30559 389 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 LRRC14Q15048 493 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 TIFABQ6ZNK6 161 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 CMC1Q7Z7K0 106 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 TRIM69Q86WT6 500 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 RBFAQ8N0V3 343 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 FRMD1Q8N878 549 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 GDAP1Q8TB36 358 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 NAT14Q8WUY8 206 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 BTN2A2Q8WVV5 523 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 GLYATL1Q969I3 302 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 VPS35Q96QK1 796 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 COPS8Q99627 209 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 MBNL1Q9NR56 388 aaKnown RBP24.06■■□□□ 1.44
LRFN4-202ENST00000393952 FAM53CQ9NYF3 392 aa24.06■■□□□ 1.44
LRFN4-202ENST00000393952 WSB2Q9NYS7 404 aaPredicted RBP24.06■■□□□ 1.44
LRFN4-202ENST00000393952 CNOT6Q9ULM6 557 aaKnown RBP24.06■■□□□ 1.44
LRFN4-202ENST00000393952 IGHV1OR15-9A0A0B4J2B8 117 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 TPP1O14773 563 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 CREB1P16220 341 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 CD6P30203 668 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 PGGT1BP53609 377 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 DNAJC3Q13217 504 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 ITIH4Q14624 930 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 USP10Q14694 798 aaKnown RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 IRF4Q15306 451 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 HECTD2Q5U5R9 776 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 C4orf33Q8N1A6 199 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 FAM160A2Q8N612 972 aaPredicted RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 TP53I13Q8NBR0 393 aaPredicted RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 BIRC8Q96P09 236 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 AARSD1Q9BTE6 412 aaKnown RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 P2RY12Q9H244 342 aa24.05■■□□□ 1.44
LRFN4-202ENST00000393952 C6orf106Q9H6K1 298 aaPredicted RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 SPATA6Q9NWH7 488 aaPredicted RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 CORO1CQ9ULV4 474 aaPredicted RBP24.05■■□□□ 1.44
LRFN4-202ENST00000393952 IGLV3-16A0A075B6K0 115 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 GOLGA8RI6L899 631 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 PRMT5O14744 637 aaPredicted RBP24.04■■□□□ 1.44
LRFN4-202ENST00000393952 RAD51BO15315 384 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 MTX2O75431 263 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 ZNF7P17097 686 aaPredicted RBP24.04■■□□□ 1.44
LRFN4-202ENST00000393952 SERPINB8P50452 374 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 TAS2R39P59534 338 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 B4GALNT1Q00973 533 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 CTSL3PQ5NE16 218 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 ZNF648Q5T619 568 aaPredicted RBP24.04■■□□□ 1.44
LRFN4-202ENST00000393952 PNCKQ6P2M8 343 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 MAMSTRQ6ZN01 415 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 DDHD1Q8NEL9 900 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 OLFM1Q99784 485 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 CLPBQ9H078 707 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 SNX15Q9NRS6 342 aa24.04■■□□□ 1.44
LRFN4-202ENST00000393952 PRSS21Q9Y6M0 314 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms