RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 TSGA13Q96PP4 275 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 PHF12Q96QT6 1004 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 OR2B2Q9GZK3 357 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 CCDC177Q9NQR7 707 aaPredicted RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 CLN6Q9NWW5 311 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ING3Q9NXR8 418 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 BTRCQ9Y297 605 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 IRGMA1A4Y4 181 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 J3QRK9 145 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 LGALS2P05162 132 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 CDKL1Q00532 357 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 MS4A2Q01362 244 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 GRSF1Q12849 480 aaKnown RBP eCLIP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 LYPLAL1Q5VWZ2 237 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SYCE2Q6PIF2 218 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 GALNT13Q8IUC8 556 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ABI1Q8IZP0 508 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 OR52K2Q8NGK3 314 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 FBXL8Q96CD0 374 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SNX6Q9UNH7 406 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TCAF2A6NFQ2 919 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 EFCAB9A8MZ26 197 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 GRID2O43424 1007 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ULK1O75385 1050 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 AHSGP02765 367 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SLC11A2P49281 568 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 CDH13P55290 713 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TARBP2Q15633 366 aaKnown RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SLC36A3Q495N2 470 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 CLEC6AQ6EIG7 209 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ESRP1Q6NXG1 681 aaKnown RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 HEATR4Q86WZ0 1026 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TMBIM1Q969X1 311 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ASIC4Q96FT7 647 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 CRELD1Q96HD1 420 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TWNKQ96RR1 684 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 YME1L1Q96TA2 773 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 OSBPL2Q9H1P3 480 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SCUBE2Q9NQ36 999 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TMEM161AQ9NX61 479 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SLC17A6Q9P2U8 582 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 GSTK1Q9Y2Q3 226 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SAMHD1Q9Y3Z3 626 aaKnown RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 PCDHB3Q9Y5E6 796 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TOP3BO95985 862 aaKnown RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 USP17L7P0C7H9 530 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 HSMCR30P0CW71 290 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ZNF26P17031 533 aaPredicted RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TALDO1P37837 337 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ANXA11P50995 505 aaKnown RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 HUNKP57058 714 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TBX4P57082 545 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SCN1BQ07699 218 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 SLC10A6Q3KNW5 377 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 TMEM214Q6NUQ4 689 aaKnown RBP8.56□□□□□ -1.04
GABRA1-202ENST00000393943 GLT6D1Q7Z4J2 308 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 ZZZ3Q8IYH5 903 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 KDM1BQ8NB78 822 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 MTERF3Q96E29 417 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 KLHL32Q96NJ5 620 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 RANBP9Q96S59 729 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 APOL5Q9BWW9 433 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 AASDHPPTQ9NRN7 309 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 AGPAT4Q9NRZ5 378 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 PCDHAC2Q9Y5I4 1007 aa8.56□□□□□ -1.04
GABRA1-202ENST00000393943 FAM220BPB1ANY3 271 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 PTTG1O95997 202 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 CNPP09543 421 aaKnown RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 HNF4AP41235 474 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 CD86P42081 329 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 PGS1Q32NB8 556 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 TECRLQ5HYJ1 363 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 C6orf141Q5SZD1 244 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 RBM20Q5T481 1227 aaKnown RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 GPR158Q5T848 1215 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 BICRALQ6AI39 1079 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 MZT2AQ6P582 158 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 ZC3H7AQ8IWR0 971 aaKnown RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 FBXO16Q8IX29 292 aaPredicted RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 OR8J3Q8NGG0 315 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 LRRN4Q8WUT4 740 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 EDEM1Q92611 657 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 HTRA1Q92743 480 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 ZYG11BQ9C0D3 744 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 CLEC4MQ9H2X3 399 aaPredicted RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 GRIP1Q9Y3R0 1128 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 ST14Q9Y5Y6 855 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 KAT6AQ92794 2004 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 FAM155AB1AL88 458 aaPredicted RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 ERN1O75460 977 aaKnown RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 ABCB1P08183 1280 aaPredicted RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 SLC35E2BP0CK96 405 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 LRRC74AQ0VAA2 488 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 TUBB3Q13509 450 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 TRIP4Q15650 581 aaPredicted RBP8.55□□□□□ -1.04
GABRA1-202ENST00000393943 ZNF404Q494X3 552 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 PLEKHG7Q6ZR37 379 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 RRM2BQ7LG56 351 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 FAM35AQ86V20 835 aa8.55□□□□□ -1.04
GABRA1-202ENST00000393943 SPATA6LQ8N4H0 392 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms