RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PMS2P1A4D2B8 440 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 EME2A4GXA9 379 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 RGSL1A5PLK6 1076 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 FAM221BA6H8Z2 402 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 STX7O15400 261 aaKnown RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC25A14O95258 325 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ECEL1O95672 775 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 MT-CO3P00414 261 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 PYGLP06737 847 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 PRSS56P0CW18 603 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 HMGCLP35914 325 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 GRIA1P42261 906 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 DUSP3P51452 185 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 DCDC1P59894 354 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ILF3Q12906 894 aaKnown RBP eCLIP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ILKQ13418 452 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 SEPT6Q14141 434 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 POU6F1Q14863 301 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRIP13Q15645 432 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ADGRG6Q86SQ4 1221 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF761Q86XN6 746 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 PHYKPLQ8IUZ5 450 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 GALNT15Q8N3T1 639 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 SDR16C5Q8N3Y7 309 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPR156Q8NFN8 814 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 OR4K2Q8NGD2 314 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 GDAP1Q8TB36 358 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 COG1Q8WTW3 980 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZDHHC1Q8WTX9 485 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 SCG3Q8WXD2 468 aaKnown RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ANP32BQ92688 251 aaKnown RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 MARVELD3Q96A59 401 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 RTP4Q96DX8 246 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 SCARF2Q96GP6 870 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZSCAN5AQ9BUG6 496 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 AP1M1Q9BXS5 423 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 GSDMCQ9BYG8 508 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 CDH19Q9H159 772 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ABCG4Q9H172 646 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRABDQ9H4I3 376 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 FAM96AQ9H5X1 160 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 ETNK1Q9HBU6 452 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRNAU1APQ9NX07 287 aaKnown RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 NFKBIL1Q9UBC1 381 aaPredicted RBP7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 CLCA2Q9UQC9 943 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 PKP3Q9Y446 797 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 CELSR3Q9NYQ7 3312 aa7.59□□□□□ -1.19
HMGB3P1-201ENST00000393368 CHD8Q9HCK8 2581 aa7.59□□□□□ -1.2
HMGB3P1-201ENST00000393368 A0A1W2PQM1 296 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 TRABD2BA6NFA1 517 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF185O15231 689 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 GRID2O43424 1007 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 LDB2O43679 373 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 NUAK1O60285 661 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 SNX2O60749 519 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CSO75390 466 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRAMEF1O95521 474 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 AP2A1O95782 977 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 RPLP0P05388 317 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 GP1BAP07359 652 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 LPOP22079 712 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 RPL22P35268 128 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 RPIAP49247 311 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 LMAN1P49257 510 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 VPS41P49754 854 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF140P52738 457 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 PDX1P52945 283 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CTSCP53634 463 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCL7P80098 99 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 E2F1Q01094 437 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CAMK2BQ13554 666 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 HLTFQ14527 1009 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 TAF1AQ15573 450 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 SEPT7Q16181 437 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCNG2Q16589 344 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ST3GAL2Q16842 350 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 P3H1Q32P28 736 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 C14orf28Q4W4Y0 310 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCDC38Q502W7 563 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CERCAMQ5T4B2 595 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 GPRC6AQ5T6X5 926 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CDCP2Q5VXM1 449 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 TTC27Q6P3X3 843 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 OGFOD3Q6PK18 319 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 LVRNQ6Q4G3 990 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 DET1Q7L5Y6 550 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 TMPRSS12Q86WS5 348 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZNF547Q8IVP9 402 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 KLHDC8BQ8IXV7 354 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 RAVER1Q8IY67 606 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 NAGSQ8N159 534 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 C17orf53Q8N3J3 647 aaPredicted RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ARL14Q8N4G2 192 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 DCBLD1Q8N8Z6 715 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 PRELID2Q8N945 189 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 CCDC89Q8N998 374 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 OR52K1Q8NGK4 314 aa7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 ZCCHC14Q8WYQ9 949 aaKnown RBP7.58□□□□□ -1.2
HMGB3P1-201ENST00000393368 GLMNQ92990 594 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms