RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 PRICKLE1Q96MT3 831 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 IL25Q9H293 177 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 LIN7BQ9HAP6 207 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 MLXQ9UH92 298 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 PKP3Q9Y446 797 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 A0A088AWK7 358 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 TNFRSF10AO00220 468 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 PLSCR1O15162 318 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 RDH16O75452 317 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 KHDRBS3O75525 346 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 SC5DO75845 299 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 CRTAMO95727 393 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ADH1AP07327 375 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 RAP2AP10114 183 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ADORA2AP29274 412 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 HALP42357 657 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 LRRC66Q68CR7 880 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 Q6ZNX1 250 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ECHDC2Q86YB7 292 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 KCT2Q8NC54 265 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 TCP10LQ8TDR4 215 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 USP29Q9HBJ7 922 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 MRPL17Q9NRX2 175 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 PCDHB3Q9Y5E6 796 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 NDUFB5O43674 189 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 GCATO75600 419 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 CRYZL1O95825 349 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 DARSP14868 501 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 S100GP29377 79 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 GRK4P32298 578 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 PGDP52209 483 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 GAD2Q05329 585 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 HIST2H2ACQ16777 129 aaPredicted RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 HIST2H2AA3Q6FI13 130 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF438Q7Z4V0 828 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 MIB1Q86YT6 1006 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 MCOLN2Q8IZK6 566 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF276Q8N554 614 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 TXNDC5Q8NBS9 432 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 DCAKDQ8WVC6 231 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 SPATA13Q96N96 652 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF570Q96NI8 536 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 NXF3Q9H4D5 531 aaKnown RBP4.86□□□□□ -1.63
PTPRD-203ENST00000381196 PLCL2Q9UPR0 1127 aa4.86□□□□□ -1.63
PTPRD-203ENST00000381196 CACNB4O00305 520 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ITM2AO43736 263 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 LIASO43766 372 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF286BP0CG31 522 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 IL7P13232 177 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ARHGDIBP52566 201 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 PUDPQ08623 228 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 HES5Q5TA89 166 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 MEDAGQ5VYS4 303 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 RPL13AP3Q6NVV1 102 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 TMPRSS11AQ6ZMR5 421 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 NLRP8Q86W28 1048 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 UBQLNLQ8IYU4 475 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 FITM2Q8N6M3 262 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 FAM71DQ8N9W8 422 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 SMG8Q8ND04 991 aaKnown RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 SLC7A13Q8TCU3 470 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 KCTD12Q96CX2 325 aaKnown RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 VRK1Q99986 396 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 SLC6A16Q9GZN6 736 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ABCG2Q9UNQ0 655 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 F5P12259 2224 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 TRIM64CA6NLI5 447 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 GSG1L2A8MUP6 293 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 AIM2O14862 343 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ENO2P09104 434 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 TGM4P49221 684 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 MRPS22P82650 360 aaKnown RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 MERTKQ12866 999 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 SLC13A2Q13183 592 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 HNF4GQ14541 408 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 USP41Q3LFD5 358 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 NKAPLQ5M9Q1 402 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 FOXR1Q6PIV2 292 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ZNF517Q6ZMY9 492 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 CCNYL1Q8N7R7 359 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 TESCQ96BS2 214 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 MIR1-1HGQ9H1L0 117 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 POLR1BQ9H9Y6 1135 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 PCDHGB5Q9Y5G0 923 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 FAM237BA0A1B0GVD1 139 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 H0YGN5 161 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 NCK2O43639 380 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 TPST1O60507 370 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ALDH3A2P51648 485 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 FOXD4Q12950 439 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 MAP2K5Q13163 448 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 ASTE1Q2TB18 679 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 COL28A1Q2UY09 1125 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 EARS2Q5JPH6 523 aaKnown RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 WDR59Q6PJI9 974 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 KIAA1324Q6UXG2 1013 aaKnown RBP4.85□□□□□ -1.63
PTPRD-203ENST00000381196 AGMOQ6ZNB7 445 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 RD3Q7Z3Z2 195 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 FAM83AQ86UY5 434 aa4.85□□□□□ -1.63
PTPRD-203ENST00000381196 CLEC10AQ8IUN9 316 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms