RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 OR10Q1Q8NGQ4 319 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 CSF3RQ99062 836 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 ADI1Q9BV57 179 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 FANCEQ9HB96 536 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 BPIFA1Q9NP55 256 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 FAM105AQ9NUU6 356 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 RABL2BQ9UNT1 228 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 DERAQ9Y315 318 aa12.4□□□□□ -0.42
PRPF40B-202ENST00000380281 UNCXA6NJT0 531 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 TNPO2O14787 897 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 MAN1A2O60476 641 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 AGTR2P50052 363 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 GEMP55040 296 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 RHDQ02161 417 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 IHHQ14623 411 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 TECRLQ5HYJ1 363 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 GNASQ5JWF2 1037 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 RAP1GAP2Q684P5 730 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 FUNDC1Q8IVP5 155 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 PBXIP1Q96AQ6 731 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 C19orf60Q96EN9 201 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 GLT1D1Q96MS3 346 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 EFHD1Q9BUP0 239 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 ZNF229Q9UJW7 825 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 SIP14410 1827 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 NME4O00746 187 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 CLOCKO15516 846 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 H2AFYO75367 372 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 RSL1D1O76021 490 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 F9P00740 461 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 CAPN3P20807 821 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 ADSLP30566 484 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 BMPR1AP36894 532 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 HADHAP40939 763 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 SERPINH1P50454 418 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 CCT8P50990 548 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 EFHBQ8N7U6 833 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 HTRA1Q92743 480 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 SH3YL1Q96HL8 342 aaPredicted RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 TDRD1Q9BXT4 1180 aaKnown RBP12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 WDR70Q9NW82 654 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 FLRT1Q9NZU1 646 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 ANKMY1Q9P2S6 941 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 DNAJC15Q9Y5T4 150 aa12.39□□□□□ -0.43
PRPF40B-202ENST00000380281 MYADML2A6NDP7 307 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 SLCO1B7G3V0H7 640 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 DLGAP1O14490 977 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 EI24O14681 340 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 KATNA1O75449 491 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 PTPN2P17706 415 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 ITGB6P18564 788 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 CD52P31358 61 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 CLK3P49761 638 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 IL1RL1Q01638 556 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 NRG1Q02297 640 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 SLC39A12Q504Y0 691 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 ATAD3BQ5T9A4 648 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 TTC9BQ8N6N2 239 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 OR7G1Q8NGA0 311 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 BRI3BPQ8WY22 251 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 NTAN1Q96AB6 310 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 RMDN1Q96DB5 314 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 SEMA3CQ99985 751 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 KATNBL1Q9H079 304 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 EML4Q9HC35 981 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 B3GNT3Q9Y2A9 372 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 C17orf102A2RUQ5 167 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 CLDN25C9JDP6 229 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 E9PAM4 449 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 M0QZ92 97 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 AP3B1O00203 1094 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 CDKN1CP49918 316 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 PRKAA2P54646 552 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 PIGFQ07326 219 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 MERTKQ12866 999 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 NFYCQ13952 458 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 CCDC58Q4VC31 144 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 MARC1Q5VT66 337 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 SPATA2LQ8IUW3 424 aaPredicted RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 TNIP2Q8NFZ5 429 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 KCTD13Q8WZ19 329 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 TEX37Q96LM6 180 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 RNF145Q96MT1 663 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 PSD2Q9BQI7 771 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 EXD2Q9NVH0 621 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 WARS2Q9UGM6 360 aaKnown RBP12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 SEPT3Q9UH03 358 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 GTF2IRD1Q9UHL9 959 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 PCDHGA8Q9Y5G5 932 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 MATN3O15232 486 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 KCNE1P15382 129 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 SPCS2Q15005 226 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 OVOS1Q6IE37 1185 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 FRA10AC1Q70Z53 315 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 ELMOD1Q8N336 334 aa12.38□□□□□ -0.43
PRPF40B-202ENST00000380281 ATAD1Q8NBU5 361 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms