RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 MITFO75030 526 aaPredicted RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 MICAL2O94851 1124 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CD36P16671 472 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 AXLP30530 894 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 TLX1P31314 330 aaPredicted RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 FABP6P51161 128 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 COLEC12Q5KU26 742 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ATG9BQ674R7 924 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 KBTBD6Q86V97 674 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CIB1Q99828 191 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 SAMD10Q9BYL1 202 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 IL22Q9GZX6 179 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 MINPP1Q9UNW1 487 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 TAF6LQ9Y6J9 622 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ATP6AP2A0A1C7CYW4 349 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 GRAP2O75791 330 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 UBXN7O94888 489 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CYP2C18P33260 490 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CTNNB1P35222 781 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 UBAP2LQ14157 1087 aaKnown RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 CARD16Q5EG05 197 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 PET117Q6UWS5 81 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 COX15Q7KZN9 410 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ATP6V0D2Q8N8Y2 350 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 OR5T1Q8NG75 326 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 STAG3L4Q8TBR4 150 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 POLR3FQ9H1D9 316 aaPredicted RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 AGRPO00253 132 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 TO15178 435 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 TIPRLO75663 272 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 PGLSO95336 258 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 TACSTD2P09758 323 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ATXN1P54253 815 aaKnown RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 SMARCB1Q12824 385 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 IDO2Q6ZQW0 420 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 LYARQ9NX58 379 aaKnown RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 ACAD8Q9UKU7 415 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 H3BNH8 94 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 NR2F1P10589 423 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 FNTBP49356 437 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CRY2Q49AN0 593 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ZNF730Q6ZMV8 503 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CYB5R4Q7L1T6 521 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ZNF347Q96SE7 839 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 HCN2Q9UL51 889 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 EIF4G3O43432 1585 aaKnown RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 CHADO15335 359 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 PAHP00439 452 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 IL2RBP14784 551 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 FMO4P31512 558 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ACSM2AQ08AH3 577 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ACSM2BQ68CK6 577 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 SHC4Q6S5L8 630 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CREB3L2Q70SY1 520 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ANKFN1Q8N957 763 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ROPN1LQ96C74 230 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 S100A16Q96FQ6 103 aaKnown RBP8.7□□□□□ -1.02
LIG3-202ENST00000378526 AGAP2Q99490 1192 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 LXNQ9BS40 222 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 TRMOQ9BU70 441 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 ETNK2Q9NVF9 386 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 BARHL2Q9NY43 387 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 NARFQ9UHQ1 456 aa8.7□□□□□ -1.02
LIG3-202ENST00000378526 CCNB2O95067 398 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 SCGB1D1O95968 90 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 HSD17B2P37059 387 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 CCR4P51679 360 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 GPAT3Q53EU6 434 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 CDK5RAP1Q96SZ6 601 aaKnown RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 PCDHGA5Q9Y5G8 931 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 TIMM8BQ9Y5J9 83 aaPredicted RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 ORC1Q13415 861 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 ADGRE1Q14246 886 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 WDR72Q3MJ13 1102 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 KLHDC7AQ5VTJ3 777 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 LPCAT4Q643R3 524 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 MARVELD2Q8N4S9 558 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 FAM160A2Q8N612 972 aaPredicted RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 OR51E2Q9H255 320 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 PDP1Q9P0J1 537 aaPredicted RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 FANCD2Q9BXW9 1451 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 FABP3P05413 133 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 ZNF7P17097 686 aaPredicted RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 RPL13AP40429 203 aaKnown RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 MAGEA11P43364 429 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 CORO6Q6QEF8 472 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 WDR53Q7Z5U6 358 aaPredicted RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 SLFN11Q7Z7L1 901 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 SYVN1Q86TM6 617 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 METTL3Q86U44 580 aaKnown RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 PNMA5Q96PV4 448 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 EIF2AK1Q9BQI3 630 aaKnown RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 TMEM121Q9BTD3 319 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 FAM126AQ9BYI3 521 aaPredicted RBP8.69□□□□□ -1.02
LIG3-202ENST00000378526 MTG2Q9H4K7 406 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 ENY2Q9NPA8 101 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 ZNF302Q9NR11 478 aa8.69□□□□□ -1.02
LIG3-202ENST00000378526 ZFP57Q9NU63 452 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms