RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 HTR1BP28222 390 aa14.96□□□□□ -0.02
NPHP4-201ENST00000378156 SCNN1AP37088 669 aa14.96□□□□□ -0.02
NPHP4-201ENST00000378156 INO80DQ53TQ3 878 aaPredicted RBP14.96□□□□□ -0.02
NPHP4-201ENST00000378156 EPHX4Q8IUS5 362 aa14.96□□□□□ -0.02
NPHP4-201ENST00000378156 CXorf40BQ96DE9 158 aa14.96□□□□□ -0.02
NPHP4-201ENST00000378156 BCO2Q9BYV7 579 aa14.96□□□□□ -0.02
NPHP4-201ENST00000378156 GLYATL1P3A0A0U1RQE8 302 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 SLC38A8A6NNN8 435 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 SLC28A1O00337 649 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 MYL12BO14950 172 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NRP2O60462 931 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 GNRH1P01148 92 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 SLC18A1P54219 525 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 LSM12Q3MHD2 195 aaKnown RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 CDC73Q6P1J9 531 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 KBTBD2Q8IY47 623 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 ASZ1Q8WWH4 475 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 PSMG2Q969U7 264 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 MAGEB10Q96LZ2 347 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 DGCR6LQ9BY27 220 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NDOR1Q9UHB4 597 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 TEX264Q9Y6I9 313 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NUP98P52948 1817 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 ARVCFO00192 962 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 HCRTO43612 131 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 STBD1O95210 358 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 FAM163BP0C2L3 166 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 SLC35G4P0C7Q5 338 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 TNK2Q07912 1038 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 IL10RBQ08334 325 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 RBM44Q6ZP01 1051 aaKnown RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 CIR1Q86X95 450 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF276Q8N554 614 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NTAN1Q96AB6 310 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 DMTF1Q9Y222 760 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 GPSM3Q9Y4H4 160 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 A0A1W2PQ67 120 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 TRIM43BA6NCK2 446 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NRP1O14786 923 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 SEC24AO95486 1093 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 POLD2P49005 469 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 TLE2Q04725 743 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 ZDHHC20Q5W0Z9 365 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 ZYG11AQ6WRX3 759 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 KBTBD8Q8NFY9 601 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 EMID1Q96A84 441 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 PLEKHG4BQ96PX9 1271 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 CNTN3Q9P232 1028 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 CACNG4Q9UBN1 327 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 PRKAG3Q9UGI9 489 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 GSTK1Q9Y2Q3 226 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 IRAK2O43187 625 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 CDH3P22223 829 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 BNC1Q01954 994 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 TCEA2Q15560 299 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 INTS11Q5TA45 600 aaKnown RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NCBP2-AS2Q69YL0 99 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 IGDCC3Q8IVU1 814 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 FSTL5Q8N475 847 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 BORCS5Q969J3 196 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 EPB41L4BQ9H329 900 aa14.95□□□□□ -0.02
NPHP4-201ENST00000378156 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 NKX1-2Q9UD57 310 aaPredicted RBP14.95□□□□□ -0.02
NPHP4-201ENST00000378156 DHRS12A0PJE2 317 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 EDIL3O43854 480 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 PROX1Q92786 737 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 AHCYL2Q96HN2 611 aaKnown RBP14.94□□□□□ -0.02
NPHP4-201ENST00000378156 HAPLN3Q96S86 360 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 PEBP4Q96S96 227 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 CHID1Q9BWS9 393 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 POLR1BQ9H9Y6 1135 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 C3orf18Q9UK00 162 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 ITM2AO43736 263 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 LYNP07948 512 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 KCNE1P15382 129 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 SLC39A8Q9C0K1 460 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 IGSF9Q9P2J2 1179 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 INSIG1O15503 277 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 IDH3BO43837 385 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 CDK14O94921 469 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 NFATC1O95644 943 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 SNAI1O95863 264 aaPredicted RBP14.94□□□□□ -0.02
NPHP4-201ENST00000378156 PEX2P28328 305 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 STAT5AP42229 794 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 SLC5A9Q2M3M2 681 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 TIGD2Q4W5G0 525 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 FGD3Q5JSP0 725 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 CLEC6AQ6EIG7 209 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 OLFML1Q6UWY5 402 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF554Q86TJ5 538 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 HERPUD2Q9BSE4 406 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 TIPRLO75663 272 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 RGS20O76081 388 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 S100A9P06702 114 aaKnown RBP14.94□□□□□ -0.02
NPHP4-201ENST00000378156 C8AP07357 584 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 CLTBP09497 229 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 NTSP30990 170 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 CXCR3P49682 368 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 SPIDRQ14159 915 aa14.94□□□□□ -0.02
NPHP4-201ENST00000378156 ZNF846Q147U1 533 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms