RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 RPIAP49247 311 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 LCP2Q13094 533 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 KIAA0319Q5VV43 1072 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 FCRL3Q96P31 734 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-202ENST00000377797 EBF4Q9BQW3 602 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 TBCDQ9BTW9 1192 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 MTF2Q9Y483 593 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-202ENST00000377797 DNTTP04053 509 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 FASP25445 335 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 HSPA13P48723 471 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 LBX1P52954 281 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 MAPKAPK3Q16644 382 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 BHLHE22Q8NFJ8 381 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-202ENST00000377797 BADQ92934 168 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 IL12RB2Q99665 862 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 CAAP1Q9H8G2 361 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF556Q9HAH1 456 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 LEF1Q9UJU2 399 aaPredicted RBP14.42□□□□□ -0.1
TCOF1-202ENST00000377797 PADI4Q9UM07 663 aa14.42□□□□□ -0.1
TCOF1-202ENST00000377797 ATXN2Q99700 1313 aaKnown RBP14.42□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3DA0A087WVF3 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3IA0A087WXS9 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3EA0A087X179 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3KA0A087X1G2 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3FA6NER0 549 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ANKDD1BA6NHY2 528 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3LB9A6J9 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ZSCAN9O15535 394 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3HP0C7X1 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 IDO1P14902 403 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ATP6V1B2P21281 511 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ITPKAP23677 461 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 NSG1P42857 185 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 LRRC23Q53EV4 343 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 LY6G5CQ5SRR4 150 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3GQ6DHY5 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3CQ6IPX1 549 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ZFP1Q6P2D0 407 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TBC1D3Q8IZP1 549 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 C10orf82Q8WW14 230 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 CASD1Q96PB1 797 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ACAT2Q9BWD1 397 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 IPPKQ9H8X2 491 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 IL23AQ9NPF7 189 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TCRBV5S1A1TA0A578 114 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 H3BM21 787 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 MAP3K13O43283 966 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 RFPL1O75677 317 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 CCNHP51946 323 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 FAM124AQ86V42 546 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 BBS7Q8IWZ6 715 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TWIST2Q8WVJ9 160 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 MRGPRX2Q96LB1 330 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ZNF778Q96MU6 729 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 LENG8Q96PV6 779 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 HBEGFQ99075 208 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 SAC3D1A6NKF1 404 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ATG13O75143 517 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ZCCHC18P0CG32 403 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 HPCAP84074 193 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 RAB33AQ14088 237 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 LSM12Q3MHD2 195 aaKnown RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TIFABQ6ZNK6 161 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 NET1Q7Z628 596 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 FAM13CQ8NE31 585 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 CYB5D2Q8WUJ1 264 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 OTUB1Q96FW1 271 aaPredicted RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 NPAS2Q99743 824 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 CCDC28BQ9BUN5 200 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ATG10Q9H0Y0 220 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 NOL11Q9H8H0 719 aaKnown RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 SLC24A3Q9HC58 644 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 SPAG4Q9NPE6 437 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 LIMD1Q9UGP4 676 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 RNASEH2AO75792 299 aaKnown RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 SLC35G4P0C7Q5 338 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 COX7A2P14406 83 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TYRP14679 529 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 TIGD2Q4W5G0 525 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 SNX20Q7Z614 316 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 CNTD1Q8N815 330 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 GDPD5Q8WTR4 605 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 CLP1Q92989 425 aaKnown RBP14.41□□□□□ -0.1
TCOF1-202ENST00000377797 OXSMQ9NWU1 459 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 MOCS1Q9NZB8 636 aa14.41□□□□□ -0.1
TCOF1-202ENST00000377797 ITM2AO43736 263 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 ATP6V1B1P15313 513 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 DDX6P26196 483 aaKnown RBP eCLIP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 IDH3AP50213 366 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 VAC14Q08AM6 782 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 PLEKHG6Q3KR16 790 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 GK5Q6ZS86 529 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 TMEM135Q86UB9 458 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 GFM2Q969S9 779 aaKnown RBP14.4□□□□□ -0.1
TCOF1-202ENST00000377797 RNF145Q96MT1 663 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 TP53BP2Q13625 1128 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 RAB41Q5JT25 222 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 PIM3Q86V86 326 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 VPS33AQ96AX1 596 aa14.4□□□□□ -0.1
TCOF1-202ENST00000377797 EIF2B4Q9UI10 523 aaKnown RBP14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms