RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 CFAP52Q8N1V2 620 aa25.14■■□□□ 1.61
C9orf40-201ENST00000376854 DNAJB14Q8TBM8 379 aa25.14■■□□□ 1.61
C9orf40-201ENST00000376854 TMEM125Q96AQ2 219 aa25.14■■□□□ 1.61
C9orf40-201ENST00000376854 VPS33AQ96AX1 596 aa25.14■■□□□ 1.61
C9orf40-201ENST00000376854 CENPNQ96H22 339 aaPredicted RBP25.14■■□□□ 1.61
C9orf40-201ENST00000376854 PHF24Q9UPV7 400 aa25.14■■□□□ 1.61
C9orf40-201ENST00000376854 SPO11Q9Y5K1 396 aa25.14■■□□□ 1.61
C9orf40-201ENST00000376854 RNF103-CHMP3A0A140T963 221 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 NCF1BA6NI72 391 aaPredicted RBP25.13■■□□□ 1.61
C9orf40-201ENST00000376854 NCF1CA8MVU1 366 aaPredicted RBP25.13■■□□□ 1.61
C9orf40-201ENST00000376854 NDUFS3O75489 264 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 NCF1P14598 390 aaPredicted RBP25.13■■□□□ 1.61
C9orf40-201ENST00000376854 TACR2P21452 398 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 RPL10P27635 214 aaKnown RBP25.13■■□□□ 1.61
C9orf40-201ENST00000376854 SPATS1Q496A3 300 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 CTXN3Q4LDR2 81 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 COLGALT2Q8IYK4 626 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 TEX37Q96LM6 180 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 ZNF599Q96NL3 588 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 C9orf16Q9BUW7 83 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 ADI1Q9BV57 179 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 TANC1Q9C0D5 1861 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 NPEPPSL1A6NEC2 478 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 SYCE1LA8MT33 242 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 BAIAP3O94812 1187 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 BMP10O95393 424 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 CDK4P11802 303 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 CYP51A1Q16850 503 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 RABL3Q5HYI8 236 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 TTC33Q6PID6 262 aaPredicted RBP25.13■■□□□ 1.61
C9orf40-201ENST00000376854 AFTPHQ6ULP2 937 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 IFNEQ86WN2 208 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 OR4K2Q8NGD2 314 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 TSPEARQ8WU66 669 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 LINC01599Q8WXQ3 324 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 FUBP1Q96AE4 644 aaKnown RBP25.13■■□□□ 1.61
C9orf40-201ENST00000376854 GPR21Q99679 349 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 ALG2Q9H553 416 aa25.13■■□□□ 1.61
C9orf40-201ENST00000376854 TMEM189-UBE2V1I3L0A0 370 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 INPP4BO15327 924 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 PRR35P0CG20 571 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 MTHFD1P11586 935 aaKnown RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 PRDX3P30048 256 aaKnown RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 CCT8P50990 548 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ARPP19P56211 112 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 MERTKQ12866 999 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 RCAN2Q14206 197 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ALG1LQ6GMV1 187 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 LGI2Q8N0V4 545 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ZNF786Q8N393 782 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 TRPV3Q8NET8 790 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 RMDN1Q96DB5 314 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 AIG1Q9NVV5 245 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 OAZ3Q9UMX2 235 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 SLC27A5Q9Y2P5 690 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 BTN3A1O00481 513 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 GPIP06744 558 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 PRKAR2AP13861 404 aaKnown RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 MYF6P23409 242 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 GSK3BP49841 420 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 AGTR2P50052 363 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 RING1Q06587 406 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 MBTPS1Q14703 1052 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ATP6AP1Q15904 470 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 KCTD21Q4G0X4 260 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ACBD5Q5T8D3 534 aaPredicted RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 SYVN1Q86TM6 617 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ERI1Q8IV48 349 aaKnown RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 BBS5Q8N3I7 341 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 KCTD14Q9BQ13 255 aaPredicted RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 MGME1Q9BQP7 344 aa25.12■■□□□ 1.61
C9orf40-201ENST00000376854 OAS3Q9Y6K5 1087 aaKnown RBP25.12■■□□□ 1.61
C9orf40-201ENST00000376854 ASPDHA6ND91 283 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 MOXD2PA6NHM9 499 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 HPCAP84074 193 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 FAM26DQ5JW98 314 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 GLT6D1Q7Z4J2 308 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 FAM81AQ8TBF8 368 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 NUSAP1Q9BXS6 441 aaKnown RBP25.11■■□□□ 1.61
C9orf40-201ENST00000376854 CCSER2Q9H7U1 834 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 F5H5T6 163 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 ESRRBO95718 433 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 CHEK2O96017 543 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 HOXD9P28356 352 aaPredicted RBP25.11■■□□□ 1.61
C9orf40-201ENST00000376854 LIPEQ05469 1076 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 FUT11Q495W5 492 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 PAGE3Q5JUK9 113 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 SCIMPQ6UWF3 145 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 TNIP2Q8NFZ5 429 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 OR7D4Q8NG98 312 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 B3GALT6Q96L58 329 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 MUC13Q9H3R2 512 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 GALPQ9UBC7 116 aa25.11■■□□□ 1.61
C9orf40-201ENST00000376854 A0A087WXM4 84 aa25.1■■□□□ 1.61
C9orf40-201ENST00000376854 STX16O14662 325 aa25.1■■□□□ 1.61
C9orf40-201ENST00000376854 UROSP10746 265 aa25.1■■□□□ 1.61
C9orf40-201ENST00000376854 ZFP36L2P47974 494 aaKnown RBP25.1■■□□□ 1.61
C9orf40-201ENST00000376854 UFM1P61960 85 aa25.1■■□□□ 1.61
C9orf40-201ENST00000376854 RBBP7Q16576 425 aa25.1■■□□□ 1.61
C9orf40-201ENST00000376854 PTPRNQ16849 979 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms