RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 DNMT3BQ9UBC3 853 aaKnown RBP20.08■□□□□ 0.8
VSX1-202ENST00000376709 ANKRD12Q6UB98 2062 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 ZBBXA8MT70 800 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 PIP5K1BO14986 540 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 LILRB3O75022 631 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 PGLSO95336 258 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 ESR1P03372 595 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 CNPP09543 421 aaKnown RBP20.07■□□□□ 0.8
VSX1-202ENST00000376709 PPM1AP35813 382 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 MRPS35P82673 323 aaKnown RBP20.07■□□□□ 0.8
VSX1-202ENST00000376709 CACNG1Q06432 222 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 KIF19Q2TAC6 998 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 REP15Q6BDI9 236 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 IRGCQ6NXR0 463 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 GAREM2Q75VX8 874 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 FAM217AQ8IXS0 508 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 STK40Q8N2I9 435 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 EEF1AKMT1Q8WVE0 214 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.07■□□□□ 0.8
VSX1-202ENST00000376709 ARMC5Q96C12 935 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 SLC25A23Q9BV35 468 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 CACNA2D2Q9NY47 1150 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 ASB3Q9Y575 518 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 PTGDR2Q9Y5Y4 395 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 COMMD10Q9Y6G5 202 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 PTPRSQ13332 1948 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 CARNS1A5YM72 827 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 SMAD6O43541 496 aaKnown RBP20.07■□□□□ 0.8
VSX1-202ENST00000376709 TGM5O43548 720 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 LRG1P02750 347 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 XIAPP98170 497 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 TPGS1Q6ZTW0 290 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 CPNE9Q8IYJ1 553 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 PCDH20Q8N6Y1 951 aaKnown RBP20.07■□□□□ 0.8
VSX1-202ENST00000376709 OR9I1Q8NGQ6 314 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 ZBP1Q9H171 429 aa20.07■□□□□ 0.8
VSX1-202ENST00000376709 EVLQ9UI08 416 aaPredicted RBP20.07■□□□□ 0.8
VSX1-202ENST00000376709 H3BNX3 289 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 CSPG5O95196 566 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 TSPAN12O95859 305 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 TCN1P20061 433 aaPredicted RBP20.06■□□□□ 0.8
VSX1-202ENST00000376709 CD9P21926 228 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 ADARP55265 1226 aaKnown RBP20.06■□□□□ 0.8
VSX1-202ENST00000376709 PSME3P61289 254 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 CREMQ03060 361 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 BCL2L1Q07817 233 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 TRIP10Q15642 601 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 LPCAT4Q643R3 524 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 BBS7Q8IWZ6 715 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 BHLHE22Q8NFJ8 381 aaPredicted RBP20.06■□□□□ 0.8
VSX1-202ENST00000376709 GDPD5Q8WTR4 605 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 ACDQ96AP0 544 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 EID2BQ96D98 161 aa20.06■□□□□ 0.8
VSX1-202ENST00000376709 SNX2O60749 519 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 ALDOCP09972 364 aaKnown RBP20.05■□□□□ 0.8
VSX1-202ENST00000376709 ATP4BP51164 291 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 MRPS22P82650 360 aaKnown RBP20.05■□□□□ 0.8
VSX1-202ENST00000376709 UGT3A1Q6NUS8 523 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 FAM151BQ6UXP7 276 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 HS6ST3Q8IZP7 471 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 PIH1D2Q8WWB5 315 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 KLHL4Q9C0H6 718 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 PCDHGA7Q9Y5G6 932 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 DENND4CQ5VZ89 1909 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 A6NHS1 94 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 IQCF5A8MTL0 148 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 FBP2O00757 339 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 STX16O14662 325 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 BAIAP3O94812 1187 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 RPS17P08708 135 aaKnown RBP20.05■□□□□ 0.8
VSX1-202ENST00000376709 PEX2P28328 305 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 ACADVLP49748 655 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 AGTR2P50052 363 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 ATXN3P54252 364 aaPredicted RBP20.05■□□□□ 0.8
VSX1-202ENST00000376709 MS4A2Q01362 244 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 TXNDC11Q6PKC3 985 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 PAOXQ6QHF9 649 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 GPSM1Q86YR5 675 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 TUBGCP3Q96CW5 907 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 ZFYVE1Q9HBF4 777 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 CD274Q9NZQ7 290 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 BTRCQ9Y297 605 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 ZNF510Q9Y2H8 683 aa20.05■□□□□ 0.8
VSX1-202ENST00000376709 C1orf232A0A0U1RR37 186 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.04■□□□□ 0.8
VSX1-202ENST00000376709 MRASO14807 208 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 PRAMEF1O95521 474 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 LINC00032P0C843 101 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 LRP8Q14114 963 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 MPPE1Q53F39 396 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 TMEM154Q6P9G4 183 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 CERS6Q6ZMG9 384 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 HTR3DQ70Z44 454 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 P2RY12Q9H244 342 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 GIMAP2Q9UG22 337 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 PSMD13Q9UNM6 376 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 A0A1B0GTL3 188 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 GOLGA8CPA6NN73 597 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 TRIM38O00635 465 aa20.04■□□□□ 0.8
VSX1-202ENST00000376709 PRMT5O14744 637 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms