RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 TRIM16O95361 564 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 ATP5BP06576 529 aaKnown RBP12.5□□□□□ -0.41
CLCN6-206ENST00000376496 SPAM1P38567 509 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 SUOXP51687 545 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 TUBB3Q13509 450 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 PFKFB4Q16877 469 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 CFAP157Q5JU67 520 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF648Q5T619 568 aaPredicted RBP12.5□□□□□ -0.41
CLCN6-206ENST00000376496 DET1Q7L5Y6 550 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 CHFRQ96EP1 664 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 LINGO1Q96FE5 620 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 P2RY12Q9H244 342 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 NSUN3Q9H649 340 aaKnown RBP12.5□□□□□ -0.41
CLCN6-206ENST00000376496 FBRSL1Q9HCM7 1045 aaKnown RBP12.5□□□□□ -0.41
CLCN6-206ENST00000376496 IL36AQ9UHA7 158 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 TRMT6Q9UJA5 497 aaKnown RBP12.5□□□□□ -0.41
CLCN6-206ENST00000376496 MID2Q9UJV3 735 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 CDH7Q9ULB5 785 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 PLA2G4CQ9UP65 541 aa12.5□□□□□ -0.41
CLCN6-206ENST00000376496 TBC1D3BA6NDS4 549 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 BTN3A1O00481 513 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 VPS26AO75436 327 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 FSBPO95073 299 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 TIMP2P16035 220 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 ITGALP20701 1170 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 ST8SIA6P61647 398 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 GRIN2CQ14957 1233 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 PDCD2Q16342 344 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 PTRHD1Q6GMV3 140 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 GRAMD4Q6IC98 578 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 Q6ZVL8 140 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 SNX20Q7Z614 316 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 SREK1Q8WXA9 508 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF641Q96N77 438 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 NSUN5Q96P11 429 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 OR52B2Q96RD2 323 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 MCCC1Q96RQ3 725 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 NUF2Q9BZD4 464 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 CDH19Q9H159 772 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 DZANK1Q9NVP4 752 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 OAS3Q9Y6K5 1087 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 TMEM114B3SHH9 223 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 PRMT5O14744 637 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 IPO13O94829 963 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 TSPAN12O95859 305 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 RBP1P09455 135 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 CD1EP15812 388 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 ETV3P41162 512 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 PTGER3P43115 390 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 KPNA2P52292 529 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 PIWIL4Q7Z3Z4 852 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 LCA5Q86VQ0 697 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 PTGR2Q8N8N7 351 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 WRAP53Q9BUR4 548 aaKnown RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 CLPBQ9H078 707 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 ILKAPQ9H0C8 392 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 WWP1Q9H0M0 922 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 ACTR5Q9H9F9 607 aaPredicted RBP12.49□□□□□ -0.41
CLCN6-206ENST00000376496 GDE1Q9NZC3 331 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 TMPRSS11EQ9UL52 423 aa12.49□□□□□ -0.41
CLCN6-206ENST00000376496 SUPT3HB4E1H0 165 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 E9PBE3 544 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 KLHL41O60662 606 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SUPT3HO75486 399 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SUPT7LO94864 414 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 MTHFD2P13995 350 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 GDI1P31150 447 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 OPRD1P41143 372 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CCDC15Q0P6D6 951 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 KLHL29Q96CT2 875 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 LYSMD1Q96S90 227 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CLDND1Q9NY35 253 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 HCN2Q9UL51 889 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CORO1CQ9ULV4 474 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 C16orf96A6NNT2 1141 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 UBFD1O14562 309 aaKnown RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SKAP2O75563 359 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 UNC5CO95185 931 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ACRV1P26436 265 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 EPHA3P29320 983 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 GJA4P35212 333 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CLCN7P51798 805 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 PRKAA2P54646 552 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF234Q14588 700 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 AARS2Q5JTZ9 985 aaKnown RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SH2D4BQ5SQS7 431 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 PARS2Q7L3T8 475 aaKnown RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ZNF557Q8N988 423 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 MARK4Q96L34 752 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 ATOH8Q96SQ7 321 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CDCA3Q99618 268 aaPredicted RBP12.48□□□□□ -0.41
CLCN6-206ENST00000376496 CACNA2D2Q9NY47 1150 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 FAM8A1Q9UBU6 413 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 RNF112Q9ULX5 631 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 SLC27A6Q9Y2P4 619 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 COQ6Q9Y2Z9 468 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
CLCN6-206ENST00000376496 PRR5-ARHGAP8B1AHC4 643 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms