RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PFKFB4Q16877 469 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 FBXO48Q5FWF7 155 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TBPL2Q6SJ96 375 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 COLGALT2Q8IYK4 626 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CHPT1Q8WUD6 406 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 PTERQ96BW5 349 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM74Q96NL1 305 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 NEURL2Q9BR09 285 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 ERVK-6Q9BXR3 956 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 PRKD2Q9BZL6 878 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 CRTAC1Q9NQ79 661 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 USP22Q9UPT9 525 aa11.04□□□□□ -0.64
CCDC40-203ENST00000374877 MYBPHLA2RUH7 354 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 OR51F1A6NGY5 319 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 CRCPO75575 148 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 C7P10643 843 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 LBPP18428 481 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 ADRA1AP35348 466 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 CXCR3P49682 368 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 WNT3AP56704 352 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 TRIM16LQ309B1 348 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 LRRC8DQ7L1W4 858 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 ANKRD33Q7Z3H0 272 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 TBC1D21Q8IYX1 336 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 OR13F1Q8NGS4 319 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 NRBF2Q96F24 287 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 PPP1R10Q96QC0 940 aaKnown RBP11.03□□□□□ -0.64
CCDC40-203ENST00000374877 SLC30A3Q99726 388 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 SLC39A8Q9C0K1 460 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 A0A0U1RQF3 1178 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 NIPAL1Q6NVV3 410 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 ZNF773Q6PK81 442 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 RAB44Q7Z6P3 723 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-203ENST00000374877 ARHGAP12Q8IWW6 846 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 SFRP1Q8N474 314 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 TMCO5AQ8N6Q1 288 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 TOP6BLQ8N6T0 577 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 ZMIZ2Q8NF64 920 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 GABPB2Q8TAK5 448 aaPredicted RBP11.03□□□□□ -0.64
CCDC40-203ENST00000374877 SNX19Q92543 992 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 TMEM125Q96AQ2 219 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 L3HYPDHQ96EM0 354 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 PCED1BQ96HM7 432 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 TOX2Q96NM4 488 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 MRM3Q9HC36 420 aaKnown RBP11.03□□□□□ -0.64
CCDC40-203ENST00000374877 INTS10Q9NVR2 710 aaKnown RBP11.03□□□□□ -0.64
CCDC40-203ENST00000374877 PCDHA9Q9Y5H5 950 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 DGKBQ9Y6T7 804 aa11.03□□□□□ -0.64
CCDC40-203ENST00000374877 UBXN8O00124 270 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 MATN3O15232 486 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 INPPL1O15357 1258 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 SYNCRIPO60506 623 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 MAFKO60675 156 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 EEF1DP29692 281 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 LEPRP48357 1165 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 TMED10P49755 219 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 EIF2B2P49770 351 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 MNX1P50219 401 aaPredicted RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 OXCT1P55809 520 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 KCNK10P57789 538 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 BROXQ5VW32 411 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 PM20D1Q6GTS8 502 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 RANBP10Q6VN20 620 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 CLEC4FQ8N1N0 589 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 NAT16Q8N8M0 369 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 TRUB1Q8WWH5 349 aaKnown RBP11.02□□□□□ -0.64
CCDC40-203ENST00000374877 IL12RB2Q99665 862 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 CHID1Q9BWS9 393 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 C8orf4Q9NR00 106 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 RGS18Q9NS28 235 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 NDFIP2Q9NV92 336 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 POLG2Q9UHN1 485 aa11.02□□□□□ -0.64
CCDC40-203ENST00000374877 RSL1D1O76021 490 aaKnown RBP11.02□□□□□ -0.65
CCDC40-203ENST00000374877 CLPXO76031 633 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 PCNAP12004 261 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 TMBIM6P55061 237 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 TPD52P55327 224 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-203ENST00000374877 MAXP61244 160 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 ECT2LQ008S8 904 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 PYCR3Q53H96 274 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 IGFN1Q86VF2 1251 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 CILP2Q8IUL8 1156 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 GOLM1Q8NBJ4 401 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 OSCP1Q8WVF1 389 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 PGAP3Q96FM1 320 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-203ENST00000374877 TUBA1CQ9BQE3 449 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 LHPPQ9H008 270 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 DAPK2Q9UIK4 370 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 ERGIC3Q9Y282 383 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 MGEA5O60502 916 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 SULT1C4O75897 302 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 MBL2P11226 248 aaPredicted RBP11.02□□□□□ -0.65
CCDC40-203ENST00000374877 COL6A1P12109 1028 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 IDO1P14902 403 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 SHMT2P34897 504 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 MLLT10P55197 1068 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 CD300CQ08708 224 aa11.02□□□□□ -0.65
CCDC40-203ENST00000374877 GRSF1Q12849 480 aaKnown RBP eCLIP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms