RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 MAP2K7O14733 419 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 CD3EAPO15446 510 aaKnown RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 RNGTTO60942 597 aaKnown RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SASH3O75995 380 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 INHBAP08476 426 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3HP0C7X1 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 GM2AP17900 193 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SPINK2P20155 84 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 OXTRP30559 389 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SLC1A2P43004 574 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 RPS21P63220 83 aaKnown RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 CACNG1Q06432 222 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF844Q08AG5 666 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 CEP85LQ5SZL2 805 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TEDDM1Q5T9Z0 273 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SEL1L3Q68CR1 1132 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3GQ6DHY5 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3CQ6IPX1 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 NEK5Q6P3R8 708 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF765Q7L2R6 523 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SNX20Q7Z614 316 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 C11orf74Q86VG3 221 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SLC26A11Q86WA9 606 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3Q8IZP1 549 aaPredicted RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 OR2T34Q8NGX1 318 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 EPS8L3Q8TE67 593 aaKnown RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 MRRFQ96E11 262 aaKnown RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SGSM3Q96HU1 749 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 AGAP2Q99490 1192 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TMEM9BQ9NQ34 198 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 KCTD5Q9NXV2 234 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SLC24A2Q9UI40 661 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 PKD1L2Q7Z442 2459 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 A0A1W2PQU0 124 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 IGLON5A6NGN9 336 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 GAPDHSO14556 408 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 RASGRF2O14827 1237 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 KHNYNO15037 678 aaKnown RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 TCEA3O75764 348 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 SEMA4FO95754 770 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CEACAM1P13688 526 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CSRP1P21291 193 aaKnown RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ACSL1P33121 698 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 MSH2P43246 934 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 SLCO1A2P46721 670 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 NFATC2Q13469 925 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ITGA9Q13797 1035 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CHRNA6Q15825 494 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 KRT71Q3SY84 523 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 TMEM259Q4ZIN3 620 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 HENMT1Q5T8I9 393 aaKnown RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 SDCCAG8Q86SQ7 713 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CROCCP2Q86T23 111 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 HORMAD1Q86X24 394 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CILP2Q8IUL8 1156 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 TRAM1L1Q8N609 369 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 C2CD4AQ8NCU7 369 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 GPR150Q8NGU9 434 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 SLC44A1Q8WWI5 657 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 SCAMP4Q969E2 229 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 AP2M1Q96CW1 435 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CPNE1Q99829 537 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ZSCAN5AQ9BUG6 496 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 TMEM109Q9BVC6 243 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 RIOK2Q9BVS4 552 aaKnown RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 SPATA16Q9BXB7 569 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ROPN1BQ9BZX4 212 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ASB8Q9H765 288 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ROPN1Q9HAT0 212 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 MARCH4Q9P2E8 410 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 PSMC3IPQ9P2W1 217 aaPredicted RBP17.39■□□□□ 0.37
PFDN6-201ENST00000374606 CRLS1Q9UJA2 301 aa17.39■□□□□ 0.37
PFDN6-201ENST00000374606 ASPMQ8IZT6 3477 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 GOLGA6L10A6NI86 522 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 PFDN6O15212 129 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 GPR39O43194 453 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 ATP8B1O43520 1251 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 UGT1A9O60656 530 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 CD6P30203 668 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 GP5P40197 560 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 PPP2CBP62714 309 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 PPP2CAP67775 309 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 MPP1Q00013 466 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 MAP7D1Q3KQU3 841 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 GPR33Q49SQ1 333 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 SETMARQ53H47 684 aaPredicted RBP17.38■□□□□ 0.37
PFDN6-201ENST00000374606 PMS2CLQ68D20 193 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 PACS1Q6VY07 963 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 KIAA0408Q6ZU52 694 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 TAOK1Q7L7X3 1001 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 TAS2R42Q7RTR8 314 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 STRA8Q7Z7C7 330 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 TRIM69Q86WT6 500 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 DENND6AQ8IWF6 608 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 ZNF398Q8TD17 642 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 DTX3LQ8TDB6 740 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 SCG3Q8WXD2 468 aaKnown RBP17.38■□□□□ 0.37
PFDN6-201ENST00000374606 GATA6Q92908 595 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 ULK4Q96C45 1275 aa17.38■□□□□ 0.37
PFDN6-201ENST00000374606 TOE1Q96GM8 510 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms