RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 RYBPQ8N488 228 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 TTC9BQ8N6N2 239 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PACRGLQ8N7B6 248 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ANKFN1Q8N957 763 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 OR13C4Q8NGS5 318 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 OR2T34Q8NGX1 318 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 OR2T3Q8NH03 318 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PLD4Q96BZ4 506 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 DGCR14Q96DF8 476 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CCT7Q99832 543 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SLC2A11Q9BYW1 496 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PRDM6Q9NQX0 595 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ARMC1Q9NVT9 282 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ABCD2Q9UBJ2 740 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 LZTS1Q9Y250 596 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 OAS3Q9Y6K5 1087 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 DOCK4Q8N1I0 1966 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ILVBLA1L0T0 632 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 NR5A2O00482 541 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PIP5K1BO14986 540 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 INSIG1O15503 277 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 TBC1D4O60343 1298 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CLASP2O75122 1294 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 VPS26AO75436 327 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CLDN11O75508 207 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 RPS17P08708 135 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ALDOCP09972 364 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ZNF26P17031 533 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PSMC3P17980 439 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ATP5C1P36542 298 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 GRIA2P42262 883 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SLC11A1P49279 550 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SLC7A2P52569 658 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 ARPP19P56211 112 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 TXNL4AP83876 142 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CLCQ05315 142 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 RPS6KA2Q15349 733 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 AARS2Q5JTZ9 985 aaKnown RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 C6orf10Q5SRN2 563 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 KLHDC10Q6PID8 442 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CHST9Q7L1S5 443 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 GLT6D1Q7Z4J2 308 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PHYKPLQ8IUZ5 450 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 DDIASQ8IXT1 998 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 FAM156AQ8NDB6 213 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 CNBD2Q96M20 576 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 PRICKLE1Q96MT3 831 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 HAUS8Q9BT25 410 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 SDR39U1Q9NRG7 319 aaPredicted RBP13.86□□□□□ -0.19
HMGCL-203ENST00000374490 UBAP1Q9NZ09 502 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 THEGQ9P2T0 379 aa13.86□□□□□ -0.19
HMGCL-203ENST00000374490 UBA6A0AVT1 1052 aaPredicted RBP13.85□□□□□ -0.19
HMGCL-203ENST00000374490 KLK8O60259 260 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 BMP2P12643 396 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 LPOP22079 712 aaPredicted RBP13.85□□□□□ -0.19
HMGCL-203ENST00000374490 EEF1DP29692 281 aaKnown RBP13.85□□□□□ -0.19
HMGCL-203ENST00000374490 TTPAP49638 278 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 CDH13P55290 713 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 RALGDSQ12967 914 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 MAP7Q14244 749 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 FUT10Q6P4F1 479 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 FUNDC1Q8IVP5 155 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 ALDH16A1Q8IZ83 802 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 CHCHD4Q8N4Q1 142 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 TRPC4APQ8TEL6 797 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 C3orf30Q96M34 536 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 PCDHAC1Q9H158 963 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 CCSER2Q9H7U1 834 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 SLC28A3Q9HAS3 691 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 SCUBE2Q9NQ36 999 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 MARCH5Q9NX47 278 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 CNOT6Q9ULM6 557 aaKnown RBP13.85□□□□□ -0.19
HMGCL-203ENST00000374490 SLC27A5Q9Y2P5 690 aa13.85□□□□□ -0.19
HMGCL-203ENST00000374490 VWA8A3KMH1 1905 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 GOLGA8CPA6NN73 597 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 H3BMM5 538 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 HNRNPRO43390 633 aaKnown RBP13.84□□□□□ -0.19
HMGCL-203ENST00000374490 TSPAN8P19075 237 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 HDCP19113 662 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 CR2P20023 1033 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 IGFBP4P22692 258 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 CLCN4P51793 760 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 ATXN3P54252 364 aaPredicted RBP13.84□□□□□ -0.19
HMGCL-203ENST00000374490 MYBPC1Q00872 1141 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 APOFQ13790 326 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 C6orf52Q5T4I8 152 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 LCN8Q6JVE9 175 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 BORAQ6PGQ7 559 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 PAQR3Q6TCH7 311 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 RNF19BQ6ZMZ0 732 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 OTOP2Q7RTS6 562 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 ERMP1Q7Z2K6 904 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 CHERPQ8IWX8 916 aaKnown RBP13.84□□□□□ -0.19
HMGCL-203ENST00000374490 CRIPAKQ8N1N5 446 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 GALNT4Q8N4A0 578 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 TUBGCP3Q96CW5 907 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 RMDN1Q96DB5 314 aa13.84□□□□□ -0.19
HMGCL-203ENST00000374490 TDRD1Q9BXT4 1180 aaKnown RBP13.84□□□□□ -0.19
HMGCL-203ENST00000374490 ADGRE3Q9BY15 652 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms