RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 VLDLRP98155 873 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 ZNF697Q5TEC3 545 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 CYP4X1Q8N118 509 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 HERC2P3Q9BVR0 1158 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 MOXD2PA6NHM9 499 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 OGNP20774 298 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PRDX5P30044 214 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 MATKP42679 507 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 OR3A3P47888 321 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 OR3A2P47893 321 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 RAB10P61026 200 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 NRG1Q02297 640 aaPredicted RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 KLHL35Q6PF15 583 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TMED4Q7Z7H5 227 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 OR2T12Q8NG77 320 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 SPATA20Q8TB22 786 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 GTPBP3Q969Y2 492 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TTLL2Q9BWV7 592 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 EQTNQ9NQ60 294 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 NOP16Q9Y3C1 178 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 NOBOXO60393 691 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 BANF1O75531 89 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 ITGA2BP08514 1039 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 CDH5P33151 784 aaPredicted RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 INSCQ1MX18 579 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 LRTOMTQ8WZ04 291 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 CDK5RAP1Q96SZ6 601 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TCF25Q9BQ70 676 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 MRPL9Q9BYD2 267 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TRAV6A0A075B6T7 132 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PRAMEF22A3QJZ6 481 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 ZC3H11AO75152 810 aaKnown RBP eCLIP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PIAS1O75925 651 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 CRYZL1O95825 349 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PPP3CAQ08209 521 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 LSM12Q3MHD2 195 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 OR10H5Q8NGA6 315 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TCTEX1D2Q8WW35 142 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TAS2R1Q9NYW7 299 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PDPK1O15530 556 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 CYP3A4P08684 503 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 CYP3A5P20815 502 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TARS2Q9BW92 718 aaKnown RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 SMURF1Q9HCE7 757 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PCDHGA11Q9Y5H2 935 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 HECW2Q9P2P5 1572 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 SULT1B1O43704 296 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 ZNF135P52742 658 aaPredicted RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PDX1P52945 283 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 ALG2Q9H553 416 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 TCF7L1Q9HCS4 588 aa15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 PRMT7Q9NVM4 692 aaPredicted RBP15.23■□□□□ 0.03
GTF3C4-201ENST00000372146 ABCA8O94911 1581 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 MYO5BQ9ULV0 1848 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 APOC3P02656 99 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TBX2Q13207 712 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 GLB1LQ6UWU2 654 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 PTGR2Q8N8N7 351 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 DPAGT1Q9H3H5 408 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 EIF2B4Q9UI10 523 aaKnown RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TMEM132BQ14DG7 1078 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 CYP2U1Q7Z449 544 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 CISHQ9NSE2 258 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 LYPLA1O75608 230 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TRAPPC5Q8IUR0 188 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 RBM15BQ8NDT2 890 aaKnown RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 PPM1MQ96MI6 270 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 SLAIN2Q9P270 581 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TRHDEQ9UKU6 1024 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 PLEKHA6Q9Y2H5 1048 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 LOC102724428A0A0B4J2F2 783 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 NEDD8-MDP1E9PL57 170 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TNFRSF11BO00300 401 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 PET100P0DJ07 73 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 ZNF35P13682 527 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 SIK1P57059 783 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 GNASQ5JWF2 1037 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 RERGQ96A58 199 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 INO80Q9ULG1 1556 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 HACD1B0YJ81 288 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 ISM1B1AKI9 464 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 CD36P16671 472 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 PSMB4P28070 264 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 AUHQ13825 339 aaKnown RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 MEA1Q16626 185 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 NXF3Q9H4D5 531 aaKnown RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 GSKIPQ9P0R6 139 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 FER1L6Q2WGJ9 1857 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TPST2O60704 377 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 CYP11B2P19099 503 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 HTR2AP28223 471 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 BEND5Q7L4P6 421 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TREX2Q9BQ50 279 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 KAT8Q9H7Z6 458 aaKnown RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 BARX2Q9UMQ3 279 aaPredicted RBP15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 TRPV2Q9Y5S1 764 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 RAMP2O60895 175 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 RAB27AP51159 221 aa15.22■□□□□ 0.03
GTF3C4-201ENST00000372146 POLR2JP52435 117 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms