RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 TBL1YQ9BQ87 522 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 BOCQ9BWV1 1114 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 CLPBQ9H078 707 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 CDH19Q9H159 772 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 HOMER3Q9NSC5 361 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 ZNHIT2Q9UHR6 403 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 SATB2Q9UPW6 733 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 PTPRQQ9UMZ3 2332 aa14.35□□□□□ -0.11
EDF1-202ENST00000371648 C2orf81A6NN90 581 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 E7EVH7 732 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 CASC3O15234 703 aaKnown RBP14.34□□□□□ -0.11
EDF1-202ENST00000371648 ATXN7O15265 892 aaPredicted RBP14.34□□□□□ -0.11
EDF1-202ENST00000371648 BUD23O43709 281 aaKnown RBP14.34□□□□□ -0.11
EDF1-202ENST00000371648 SLC25A14O95258 325 aaPredicted RBP14.34□□□□□ -0.11
EDF1-202ENST00000371648 ATP1A1P05023 1023 aaKnown RBP14.34□□□□□ -0.11
EDF1-202ENST00000371648 CEACAM5P06731 702 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 CELA2BP08218 269 aaPredicted RBP14.34□□□□□ -0.11
EDF1-202ENST00000371648 BPIP17213 487 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 HMGCLP35914 325 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 RPIAP49247 311 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 C6orf132Q5T0Z8 1188 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 TRIM74Q86UV6 250 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 SDR16C5Q8N3Y7 309 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 FAM46DQ8NEK8 389 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 WDR24Q96S15 920 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 GORASP1Q9BQQ3 440 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 ZSCAN5AQ9BUG6 496 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 TMEM168Q9H0V1 697 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 SYNDIG1Q9H7V2 258 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 SIRPGQ9P1W8 387 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 SUFUQ9UMX1 484 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 GPR34Q9UPC5 381 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 ZKSCAN5Q9Y2L8 839 aa14.34□□□□□ -0.11
EDF1-202ENST00000371648 A0A1W2PNU3 283 aaPredicted RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 FADS2P1A8MWK0 482 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 STX7O15400 261 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 DXOO77932 396 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 CRTAMO95727 393 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 SOD1P00441 154 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 ETS1P14921 441 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 RBMS1P29558 406 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 ADRA1AP35348 466 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 ERVPABLB-1P60509 514 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 C19orf57Q0VDD7 668 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 OLIG2Q13516 323 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 OASLQ15646 514 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 HENMT1Q5T8I9 393 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 ZDHHC20Q5W0Z9 365 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 KCTD16Q68DU8 428 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 FOXR1Q6PIV2 292 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 LVRNQ6Q4G3 990 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 RBM44Q6ZP01 1051 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 GDAP1Q8TB36 358 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 MS4A14Q96JA4 679 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 NAP1L3Q99457 506 aaPredicted RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 FRMD8Q9BZ67 464 aaPredicted RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 DPEP2Q9H4A9 486 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 LRRC40Q9H9A6 602 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 ASCL3Q9NQ33 180 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.33□□□□□ -0.12
EDF1-202ENST00000371648 PADI4Q9UM07 663 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 DRG1Q9Y295 367 aaKnown RBP14.33□□□□□ -0.12
EDF1-202ENST00000371648 ENTPD2Q9Y5L3 495 aa14.33□□□□□ -0.12
EDF1-202ENST00000371648 TEX51A0A1B0GUA7 166 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 USP27XA6NNY8 438 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 TK2O00142 265 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 KLK10O43240 276 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 GAS8O95995 478 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 FUCA1P04066 466 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 TPH1P17752 444 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 LPOP22079 712 aaPredicted RBP14.32□□□□□ -0.12
EDF1-202ENST00000371648 FDFT1P37268 417 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 DCDC1P59894 354 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 GNG11P61952 73 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 ILF3Q12906 894 aaKnown RBP eCLIP14.32□□□□□ -0.12
EDF1-202ENST00000371648 SIX1Q15475 284 aaPredicted RBP14.32□□□□□ -0.12
EDF1-202ENST00000371648 TAF1AQ15573 450 aaPredicted RBP14.32□□□□□ -0.12
EDF1-202ENST00000371648 BROXQ5VW32 411 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 PRUNE1Q86TP1 453 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 LINC00523Q86TU6 105 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 GALNT13Q8IUC8 556 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 TTC30BQ8N4P2 665 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 TRAM1L1Q8N609 369 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 BRSK1Q8TDC3 778 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 KCNE4Q8WWG9 221 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 NAT6Q93015 286 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 RTP4Q96DX8 246 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 COX14Q96I36 57 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 CCDC3Q9BQI4 270 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 GSDMCQ9BYG8 508 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 ETNK1Q9HBU6 452 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 CPNE5Q9HCH3 593 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 ARFGAP3Q9NP61 516 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 RAB6BQ9NRW1 208 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 THSD1Q9NS62 852 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 IL17CQ9P0M4 197 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 FEZ2Q9UHY8 353 aaPredicted RBP14.32□□□□□ -0.12
EDF1-202ENST00000371648 CNOT6Q9ULM6 557 aaKnown RBP14.32□□□□□ -0.12
EDF1-202ENST00000371648 PYCARDQ9ULZ3 195 aa14.32□□□□□ -0.12
EDF1-202ENST00000371648 SLC17A4Q9Y2C5 497 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms