RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 LATS1O95835 1130 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 KRT14P02533 472 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 MYF5P13349 255 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 HSD3B1P14060 373 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 HOXB8P17481 243 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 RPL22P35268 128 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 AVPR1AP37288 418 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 RPL21P46778 160 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 CARSP49589 748 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 PAPOLAP51003 745 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 VSNL1P62760 191 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TUBB4BP68371 445 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 BTKQ06187 659 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 GALNT2Q10471 571 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 XRCC4Q13426 336 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 PTK6Q13882 451 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 DHX34Q14147 1143 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 PRKD1Q15139 912 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZNF77Q15935 545 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 PDCD2Q16342 344 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 MUM1Q2TAK8 710 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 IZUMO3Q5VZ72 239 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 HIBCHQ6NVY1 386 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 LRRC31Q6UY01 552 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CCNI2Q6ZMN8 369 aaPredicted RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 Q7L0L9 218 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TMEM25Q86YD3 366 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 UMODL1-AS1Q8N2C9 162 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 PIP4K2CQ8TBX8 421 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 SEC14L1Q92503 715 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 FGF13Q92913 245 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 QKIQ96PU8 341 aaKnown RBP eCLIP3.6□□□□□ -1.83
MCF2-202ENST00000370573 MYADMQ96S97 322 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ERP44Q9BS26 406 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 TRIM31Q9BZY9 425 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 DPH5Q9H2P9 285 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CATSPERBQ9H7T0 1116 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 ZMAT3Q9HA38 289 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 EPB41L5Q9HCM4 733 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 GRHL1Q9NZI5 618 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 GRHPRQ9UBQ7 328 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 CLEC4EQ9ULY5 219 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 SRPK3Q9UPE1 567 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 SNX24Q9Y343 169 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 SH3BP1Q9Y3L3 701 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 HELZP42694 1942 aaKnown RBP3.6□□□□□ -1.83
MCF2-202ENST00000370573 CLUHO75153 1309 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 DOCK8Q8NF50 2099 aa3.6□□□□□ -1.83
MCF2-202ENST00000370573 PRUNE2Q8WUY3 3088 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 HACD1B0YJ81 288 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 SGK1O00141 431 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 DFFAO00273 331 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 MCF2LO15068 1137 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 PEX11BO96011 259 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 CYBBP04839 570 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 INHBBP09529 407 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 TSHRP16473 764 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 FCARP24071 287 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 ECHS1P30084 290 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 ACVRL1P37023 503 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 MC3RP41968 323 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 NUMBP49757 651 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 DRG2P55039 364 aaKnown RBP3.59□□□□□ -1.83
MCF2-202ENST00000370573 CDH4P55283 916 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 PPIDQ08752 370 aaKnown RBP3.59□□□□□ -1.83
MCF2-202ENST00000370573 WASHC5Q12768 1159 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 MTA1Q13330 715 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 IL10RAQ13651 578 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 PDK1Q15118 436 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 SLC45A4Q5BKX6 768 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 FSCBQ5H9T9 825 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 TANGO2Q6ICL3 276 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 PAQR3Q6TCH7 311 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 ZDHHC24Q6UX98 284 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 EP400NLQ6ZTU2 488 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 GET4Q7L5D6 327 aaPredicted RBP3.59□□□□□ -1.83
MCF2-202ENST00000370573 GSTA5Q7RTV2 222 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 TMEFF1Q8IYR6 380 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 ADGRG2Q8IZP9 1017 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 CPXM2Q8N436 756 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 LZTR1Q8N653 840 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 RNF152Q8N8N0 203 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 OR10H5Q8NGA6 315 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 WFDC5Q8TCV5 224 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 RSAD2Q8WXG1 361 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 PABPC5Q96DU9 382 aaKnown RBP3.59□□□□□ -1.83
MCF2-202ENST00000370573 RTP4Q96DX8 246 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 TMA16Q96EY4 203 aaKnown RBP3.59□□□□□ -1.83
MCF2-202ENST00000370573 HMCESQ96FZ2 354 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 UBXN10Q96LJ8 280 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 CCDC114Q96M63 670 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 PWWP2AQ96N64 755 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 RUNDC3BQ96NL0 473 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 TSGA13Q96PP4 275 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 DDX50Q9BQ39 737 aaKnown RBP3.59□□□□□ -1.83
MCF2-202ENST00000370573 PLA2G2FQ9BZM2 168 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 NEUROG2Q9H2A3 272 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 ACSS2Q9NR19 701 aa3.59□□□□□ -1.83
MCF2-202ENST00000370573 FEZ2Q9UHY8 353 aaPredicted RBP3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms