RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 RAET1GQ6H3X3 334 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 C16orf87Q6PH81 154 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 OOSP2Q86WS3 158 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 TRIM48Q8IWZ4 208 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PGAM4Q8N0Y7 254 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RNF148Q8N7C7 305 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 OR2AP1Q8NGE2 309 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 OR13C4Q8NGS5 318 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ACTRT2Q8TDY3 377 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 TWIST2Q8WVJ9 160 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 CLP1Q92989 425 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 GFM2Q969S9 779 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PAWRQ96IZ0 340 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MRGPRX2Q96LB1 330 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 CNBD2Q96M20 576 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 TOX2Q96NM4 488 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 QRFPRQ96P65 431 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ERVK-6Q9BXR3 956 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 IGFLR1Q9H665 355 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 BRD9Q9H8M2 597 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DUS2Q9NX74 493 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SAGE1Q9NXZ1 904 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 HSFX1Q9UBD0 423 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 NKX1-2Q9UD57 310 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PSAT1Q9Y617 370 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 KCNE2Q9Y6J6 123 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 FER1L6Q2WGJ9 1857 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ATP6AP2A0A1C7CYW4 349 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PRR23AA6NEV1 266 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 C2orf71A6NGG8 1288 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 INPP4BO15327 924 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SGTAO43765 313 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ATG13O75143 517 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 STK16O75716 305 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC22A3O75751 556 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ATP6AP2O75787 350 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 LDLRP01130 860 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ANPEPP15144 967 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PFKLP17858 780 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SOAT1P35610 550 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 LEPRP48357 1165 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RXRGP48443 463 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RPL34P49207 117 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RPS6KA3P51812 740 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 STC1P52823 247 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PTPN5P54829 565 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 IRF9Q00978 393 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 CDC16Q13042 620 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 HERC3Q15034 1050 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 LSM12Q3MHD2 195 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 KHDC1Q4VXA5 237 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ATXN7L2Q5T6C5 722 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SULT1C3Q6IMI6 304 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ARMC6Q6NXE6 501 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 IYDQ6PHW0 289 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 UBE2R2Q712K3 238 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RRM2BQ7LG56 351 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DHDDSQ86SQ9 333 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF598Q86UK7 904 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 BHLHE22Q8NFJ8 381 aaPredicted RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM81AQ8TBF8 368 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 IGSF8Q969P0 613 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 OTUB2Q96DC9 234 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MARK4Q96L34 752 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DHRS4Q9BTZ2 278 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 C9orf16Q9BUW7 83 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 TNKS2Q9H2K2 1166 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 OSGEPL1Q9H4B0 414 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 RAD21L1Q9H4I0 556 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SUV39H2Q9H5I1 410 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MIEF1Q9NQG6 463 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ABCB8Q9NUT2 735 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DDX18Q9NVP1 670 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 WARS2Q9UGM6 360 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SLC2A6Q9UGQ3 507 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 BTRCQ9Y297 605 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 AP4S1Q9Y587 144 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 KIAA1217Q5T5P2 1943 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MYO1GB0I1T2 1018 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PER2O15055 1255 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 KERAO60938 352 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SOCS5O75159 536 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ZMPSTE24O75844 475 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ALDOAP04075 364 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 C8GP07360 202 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 LINC00032P0C843 101 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DGKGP49619 791 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DNAJB13P59910 316 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 FAM189BP81408 668 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MRPS22P82650 360 aaKnown RBP5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ECT2LQ008S8 904 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PLIN5Q00G26 463 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ZNF460Q14592 562 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 PCLAFQ15004 111 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 MAPKAPK3Q16644 382 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ANO7Q6IWH7 933 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 BRAT1Q6PJG6 821 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 ISLR2Q6UXK2 745 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 DET1Q7L5Y6 550 aa5.28□□□□□ -1.56
SMNDC1-202ENST00000369603 SYT12Q8IV01 421 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms