RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 GRIN3AQ8TCU5 1115 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 WBP2Q969T9 261 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 DGCR14Q96DF8 476 aaKnown RBP17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 C1orf50Q9BV19 199 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 SAC3D1A6NKF1 404 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 COCHO43405 550 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 TBC1D4O60343 1298 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 BAIAP3O94812 1187 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF177Q13360 481 aaPredicted RBP17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 LRRC58Q96CX6 371 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF597Q96LX8 424 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 CDK15Q96Q40 435 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 TMEM79Q9BSE2 394 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 HGH1Q9BTY7 390 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC2A11Q9BYW1 496 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 STARD7Q9NQZ5 370 aa17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 CNOT11Q9UKZ1 510 aaKnown RBP17.97■□□□□ 0.47
UBQLN4-201ENST00000368309 SNAP91O60641 907 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 GALTP07902 379 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 CR2P20023 1033 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 LPOP22079 712 aaPredicted RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 SLC6A2P23975 617 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 CORO1AP31146 461 aaKnown RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 ARL1P40616 181 aaPredicted RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 RBBP7Q16576 425 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 FUT11Q495W5 492 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 HABP4Q5JVS0 413 aaKnown RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 LRRC8DQ7L1W4 858 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 HOPXQ9BPY8 73 aaPredicted RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 TTPALQ9BTX7 342 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 MUC3BQ9H195 1237 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 ZNF696Q9H7X3 374 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 LRFN2Q9ULH4 789 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 COMMD3-BMI1R4GMX3 469 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 VILLO15195 856 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 OR1D2P34982 312 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 HK3P52790 923 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 PRKCQQ04759 706 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 RABL3Q5HYI8 236 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 RNF219Q5W0B1 726 aaPredicted RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 TAS2R42Q7RTR8 314 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 FBXO22Q8NEZ5 403 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 RIN3Q8TB24 985 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 RIMKLBQ9ULI2 386 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 BBIP1A8MTZ0 92 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 ANKRD66B4E2M5 251 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 PLOD2O00469 737 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 SOCS2O14508 198 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 SPATA31D3P0C874 917 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 PKMP14618 531 aaKnown RBP17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 ATP6V0D1P61421 351 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 GPNMBQ14956 572 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 MYLK3Q32MK0 819 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 C5orf22Q49AR2 442 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 SPATA31D4Q6ZUB0 917 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 CPNE9Q8IYJ1 553 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 ZFP28Q8NHY6 868 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 SLAMF8Q9P0V8 285 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 GPR45Q9Y5Y3 372 aa17.96■□□□□ 0.47
UBQLN4-201ENST00000368309 PDLIM1O00151 329 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 UFM1P61960 85 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 TBCELQ5QJ74 424 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 ACBD5Q5T8D3 534 aaPredicted RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 BLOC1S3Q6QNY0 202 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CHERPQ8IWX8 916 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 BHMTQ93088 406 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 LINGO1Q96FE5 620 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 HBEGFQ99075 208 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 MRPS26Q9BYN8 205 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 RNF38Q9H0F5 515 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 PIF1Q9H611 641 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 TRMT6Q9UJA5 497 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 OAS3Q9Y6K5 1087 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 A0A1B0GVG6 124 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 A0A1W2PQ45 241 aaPredicted RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 A0A1W2PQY0 241 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 ZNF840PA6NDX5 716 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 STX7O15400 261 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 VPS26AO75436 327 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 TSPAN12O95859 305 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CYBBP04839 570 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 PYGLP06737 847 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CTSL3PQ5NE16 218 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CAAP1Q9H8G2 361 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 SMPD4Q9NXE4 827 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CD274Q9NZQ7 290 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 EIF2B4Q9UI10 523 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 MOXD2PA6NHM9 499 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 TBKBP1A7MCY6 615 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 SYCE1LA8MT33 242 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CLDN11O75508 207 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 RPS17P08708 135 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 MTHFD1P11586 935 aaKnown RBP17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 IDO1P14902 403 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 TWF1Q12792 350 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 ANKS3Q6ZW76 656 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 CDYL2Q8N8U2 506 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 VCX3AQ9NNX9 186 aa17.95■□□□□ 0.46
UBQLN4-201ENST00000368309 PCTPQ9UKL6 214 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms