RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 USP10Q14694 798 aaKnown RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 TMEM52BQ4KMG9 183 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 ZRANB3Q5FWF4 1079 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 CTSL3PQ5NE16 218 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 C16orf46Q6P387 395 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 TMEM207Q6UWW9 146 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 ERN2Q76MJ5 926 aaKnown RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 SNX20Q7Z614 316 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 SERPINA9Q86WD7 417 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 CENPLQ8N0S6 344 aaPredicted RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 GPATCH11Q8N954 259 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 ZNF398Q8TD17 642 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 DTX3LQ8TDB6 740 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 CKAP2Q8WWK9 683 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 ELMO2Q96JJ3 720 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 PLEKHG4BQ96PX9 1271 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 AARSD1Q9BTE6 412 aaKnown RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 SLC13A1Q9BZW2 595 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 MKRN2Q9H000 416 aaKnown RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 IGSF5Q9NSI5 407 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 INTS9Q9NV88 658 aaKnown RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 NFKBIL1Q9UBC1 381 aaPredicted RBP9.43□□□□□ -0.9
VTA1-201ENST00000367621 GALPQ9UBC7 116 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 SERGEFQ9UGK8 458 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 APPL1Q9UKG1 709 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 CRYL1Q9Y2S2 319 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 VWA7Q9Y334 891 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 FADS3Q9Y5Q0 445 aa9.43□□□□□ -0.9
VTA1-201ENST00000367621 BPTFQ12830 3046 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 IGLV3-16A0A075B6K0 115 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 RGSL1A5PLK6 1076 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 TM9SF1O15321 606 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 MID1O15344 667 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 PLIN3O60664 434 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 KLF8O95600 359 aaPredicted RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 PROCP04070 461 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 SBK3P0C264 359 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 CD72P21854 359 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 CRABP2P29373 138 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 PMLP29590 882 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 LIG3P49916 1009 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 ADARP55265 1226 aaKnown RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 DCDC1P59894 354 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 RAB10P61026 200 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 GNGT1P63211 74 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 MRPS21P82921 87 aaKnown RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 B4GALNT1Q00973 533 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 PFKPQ01813 784 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 ZP2Q05996 745 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 GRSF1Q12849 480 aaKnown RBP eCLIP9.42□□□□□ -0.9
VTA1-201ENST00000367621 TERF2Q15554 542 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 CST6Q15828 149 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 INSCQ1MX18 579 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 GPR33Q49SQ1 333 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 ATP13A5Q4VNC0 1218 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 HENMT1Q5T8I9 393 aaKnown RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 N4BP2L1Q5TBK1 243 aaPredicted RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 AGBL4Q5VU57 503 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 LVRNQ6Q4G3 990 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 Q6ZVL8 140 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 TAS2R42Q7RTR8 314 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 DSG4Q86SJ6 1040 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 NXPE1Q8N323 547 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 OTUD6BQ8N6M0 293 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 PAF1Q8N7H5 531 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 TXNDC5Q8NBS9 432 aaKnown RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 OR2T3Q8NH03 318 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 SCAMP4Q969E2 229 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 UBXN10Q96LJ8 280 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 ZNF317Q96PQ6 595 aaPredicted RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 FAM111AQ96PZ2 611 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 BOCQ9BWV1 1114 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 ABCG8Q9H221 673 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 VPS11Q9H270 941 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 ASB8Q9H765 288 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 NKIRAS1Q9NYS0 192 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 TMEM216Q9P0N5 145 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 MAP10Q9P2G4 905 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 DCDC2Q9UHG0 476 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 MBD1Q9UIS9 605 aaPredicted RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 CORO1CQ9ULV4 474 aaPredicted RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 DUSP12Q9UNI6 340 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 FNDC3AQ9Y2H6 1198 aaKnown RBP9.42□□□□□ -0.9
VTA1-201ENST00000367621 PRSS21Q9Y6M0 314 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 SLC30A1Q9Y6M5 507 aa9.42□□□□□ -0.9
VTA1-201ENST00000367621 SRRM3A6NNA2 597 aaPredicted RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 TARM1B6A8C7 271 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 H0Y858 1186 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PSMD11O00231 422 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 SYNCRIPO60506 623 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 DNAJC6O75061 913 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 NDUFS3O75489 264 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 SOD1P00441 154 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 GSTA1P08263 222 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 PKMP14618 531 aaKnown RBP9.41□□□□□ -0.9
VTA1-201ENST00000367621 STMN1P16949 149 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 TAC1P20366 129 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 ITGALP20701 1170 aa9.41□□□□□ -0.9
VTA1-201ENST00000367621 SAT1P21673 171 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms