RNA–Protein interactions for RNA: ENST00000366942.3

USH2A-202, Transcript of usherin, humanhuman

TSL 1 (best) BASIC

Gene USH2A, Length 6,320 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-202ENST00000366942 TMEM176AQ96HP8 235 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 CLPTM1LQ96KA5 538 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 CEP19Q96LK0 163 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 CXorf56Q9H5V9 222 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 SPATA7Q9P0W8 599 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 ANKMY1Q9P2S6 941 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PNMA8BQ9ULN7 279 aaPredicted RBP4.08□□□□□ -1.76
USH2A-202ENST00000366942 GRIP1Q9Y3R0 1128 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 A0A0U1RQF3 1178 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 TRIM64BA6NI03 449 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 KCNJ18B7U540 433 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 NRP1O14786 923 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 WNT9AO14904 365 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 COQ9O75208 318 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 NUDT17P0C025 328 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 ADH7P40394 386 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 SMIM11AP58511 58 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 KCNJ12Q14500 433 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PRKD1Q15139 912 aaPredicted RBP4.08□□□□□ -1.76
USH2A-202ENST00000366942 TEAD2Q15562 447 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 UBXN11Q5T124 520 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 C6orf183Q5T699 404 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 INTS11Q5TA45 600 aaKnown RBP4.08□□□□□ -1.76
USH2A-202ENST00000366942 PSAPL1Q6NUJ1 521 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 OPN5Q6U736 354 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 RTL4Q6ZR62 310 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 VN1R5Q7Z5H4 357 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 DEFB119Q8N690 84 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PIK3C3Q8NEB9 887 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 SPATA20Q8TB22 786 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 DNAJB14Q8TBM8 379 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 M1APQ8TC57 530 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 RASGRP4Q8TDF6 673 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 CREB3L4Q8TEY5 395 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 IRGQQ8WZA9 623 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 CLP1Q92989 425 aaKnown RBP4.08□□□□□ -1.76
USH2A-202ENST00000366942 ATG10Q9H0Y0 220 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PIGUQ9H490 435 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 L2HGDHQ9H9P8 463 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 AGO4Q9HCK5 861 aaKnown RBP4.08□□□□□ -1.76
USH2A-202ENST00000366942 PLEK2Q9NYT0 353 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 HEY2Q9UBP5 337 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PRODH2Q9UF12 536 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PPT2Q9UMR5 302 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PCDHGB1Q9Y5G3 927 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 PCDHGA8Q9Y5G5 932 aa4.08□□□□□ -1.76
USH2A-202ENST00000366942 NSG1A0A0A6YYJ2 146 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 PCDH17O14917 1159 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ATXN7O15265 892 aaPredicted RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 RGS16O15492 202 aaPredicted RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 SMNDC1O75940 238 aaKnown RBP eCLIP4.07□□□□□ -1.76
USH2A-202ENST00000366942 OR2B3O76000 313 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 FKBP9O95302 570 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 LSM8O95777 96 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 TACR2P21452 398 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 GRK5P34947 590 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 NSG1P42857 185 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 TTPAP49638 278 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 SEPHS1P49903 392 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 MECP2P51608 486 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 RACK1P63244 317 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 RAPSNQ13702 412 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 EFTUD2Q15029 972 aaKnown RBP eCLIP4.07□□□□□ -1.76
USH2A-202ENST00000366942 KCNJ8Q15842 424 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 TATDN3Q17R31 274 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ZXDCQ2QGD7 858 aaPredicted RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 KCTD11Q693B1 232 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 WDR93Q6P2C0 686 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 FKBP9P1Q75LS8 142 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 RAB11FIP2Q7L804 512 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 MMAAQ8IVH4 418 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 TRIB2Q92519 343 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ZNF583Q96ND8 569 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 UNKQ9C0B0 810 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 PORCNQ9H237 461 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 CALML5Q9NZT1 146 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ZSWIM5Q9P217 1185 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 DKK3Q9UBP4 350 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 FAM153AQ9UHL3 310 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 AGO1Q9UL18 857 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 A0A1W2PPW3 197 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 FAM220BPB1ANY3 271 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 PHGDHO43175 533 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 AKAP10O43572 662 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 MMP1P03956 469 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 RBP1P09455 135 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ENO3P13929 434 aaPredicted RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 FDPSP14324 419 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 CCND1P24385 295 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ZNF84P51523 738 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 AIF1P55008 147 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 OR4D2P58180 307 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 PURAQ00577 322 aaKnown RBP4.07□□□□□ -1.76
USH2A-202ENST00000366942 CARD16Q5EG05 197 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 ARMC4Q5T2S8 1044 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 CERS6Q6ZMG9 384 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 RINLQ6ZS11 566 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 B4GALNT4Q76KP1 1039 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 RBFAQ8N0V3 343 aa4.07□□□□□ -1.76
USH2A-202ENST00000366942 METTL25Q8N6Q8 603 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms