RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 CLCNKBP51801 687 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 LSM3P62310 102 aaKnown RBP13.51□□□□□ -0.25
PRKN-205ENST00000366897 ADARB1P78563 741 aaKnown RBP13.51□□□□□ -0.25
PRKN-205ENST00000366897 AQP6Q13520 282 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 SELPLGQ14242 412 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 SEMA3AQ14563 771 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 SNX17Q15036 470 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 PDCD4Q53EL6 469 aaKnown RBP13.51□□□□□ -0.25
PRKN-205ENST00000366897 CD320Q9NPF0 282 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 SACM1LQ9NTJ5 587 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.51□□□□□ -0.25
PRKN-205ENST00000366897 UTS2RQ9UKP6 389 aa13.51□□□□□ -0.25
PRKN-205ENST00000366897 FNDC3AQ9Y2H6 1198 aaKnown RBP13.51□□□□□ -0.25
PRKN-205ENST00000366897 RBMX2Q9Y388 322 aaKnown RBP13.51□□□□□ -0.25
PRKN-205ENST00000366897 CASP8AP2Q9UKL3 1982 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 GABRDO14764 452 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 F9P00740 461 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 KCNK10P57789 538 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 MEP1AQ16819 746 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 UGT3A1Q6NUS8 523 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 ZNF773Q6PK81 442 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 ZNF513Q8N8E2 541 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 BLOC1S5Q8TDH9 187 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TMBIM1Q969X1 311 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 MYLPFQ96A32 169 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 L3HYPDHQ96EM0 354 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TSPAN17Q96FV3 270 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TMEM209Q96SK2 561 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 NTN4Q9HB63 628 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 SLC52A3Q9NQ40 469 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 ARL5AQ9Y689 179 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 HTTP42858 3142 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TMEM247A6NEH6 219 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 PTGES3LE9PB15 166 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 SULT1C4O75897 302 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 GPIP06744 558 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 MMP3P08254 477 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 HAPLN1P10915 354 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 AGXTP21549 392 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 DNAJB2P25686 324 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 ATP4BP51164 291 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 PLA2G16P53816 162 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 RAD23AP54725 363 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TIAL1Q01085 375 aaKnown RBP eCLIP13.5□□□□□ -0.25
PRKN-205ENST00000366897 TRIM16LQ309B1 348 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 KDELC1Q6UW63 502 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 USP51Q70EK9 711 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 ABI1Q8IZP0 508 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 OR6J1Q8NGC5 347 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 CHPT1Q8WUD6 406 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 SLC22A17Q8WUG5 538 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 BRI3BPQ8WY22 251 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 PGAP3Q96FM1 320 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 ITCHQ96J02 903 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 CDK15Q96Q40 435 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 GAD1Q99259 594 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TRMOQ9BU70 441 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TSPYL2Q9H2G4 693 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 AASSQ9UDR5 926 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 DAPK2Q9UIK4 370 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 CCL15-CCL14A0A0B4J2E2 113 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 UBA6A0AVT1 1052 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 MBL2P11226 248 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 KCNE1P15382 129 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 IL12AP29459 219 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TPD52P55327 224 aaPredicted RBP13.5□□□□□ -0.25
PRKN-205ENST00000366897 OXCT1P55809 520 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 CCL15Q16663 113 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 PRAMEF19Q5SWL8 479 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 PRMT9Q6P2P2 845 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 KIAA0408Q6ZU52 694 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 OR13C4Q8NGS5 318 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TAMM41Q96BW9 452 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 YIPF2Q9BWQ6 316 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 PCDHGA11Q9Y5H2 935 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 GPR45Q9Y5Y3 372 aa13.5□□□□□ -0.25
PRKN-205ENST00000366897 TREHO43280 583 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 CLPXO76031 633 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 SMIM10L2AP0DMW4 78 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 SMIM10L2BP0DMW5 78 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 NFKBIAP25963 317 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 TTKP33981 857 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 ARSFP54793 590 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 YWHAHQ04917 246 aaPredicted RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 GALNT1Q10472 559 aaPredicted RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 RAB41Q5JT25 222 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 SFRP1Q8N474 314 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 ABHD11Q8NFV4 315 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 OR2T11Q8NH01 316 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 CALML6Q8TD86 181 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 CASP10Q92851 521 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.49□□□□□ -0.253e-8■■■■■ 70.6
PRKN-205ENST00000366897 PRKD2Q9BZL6 878 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 CCDC90BQ9GZT6 254 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 ERGIC3Q9Y282 383 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 COL1A2P08123 1366 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 TRIP12Q14669 1992 aaPredicted RBP13.49□□□□□ -0.25
PRKN-205ENST00000366897 A0A1W2PP18 115 aa13.49□□□□□ -0.25
PRKN-205ENST00000366897 KRBA1A5PL33 1030 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms