RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 GLYATL1P3A0A0U1RQE8 302 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF280AP59817 542 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 SKIV2LQ15477 1246 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 LIN52Q52LA3 116 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 AGMOQ6ZNB7 445 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 RASAL3Q86YV0 1011 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF567Q8N184 647 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ING3Q9NXR8 418 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ADGRE2Q9UHX3 823 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 B4GALT5O43286 388 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 FAUP35544 74 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 NSG1P42857 185 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 BEX3Q00994 111 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 NOGQ13253 232 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 BIKQ13323 160 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 MRM3Q9HC36 420 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 GMIPQ9P107 970 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 SUCOQ9UBS9 1254 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ING4Q9UNL4 249 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 SNED1Q8TER0 1413 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TRIP11Q15643 1979 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 FAM86C2PA6NEL3 165 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 IRAK2O43187 625 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 LYPLA1O75608 230 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 SERPINA1P01009 418 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 HSD17B2P37059 387 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 CLK3P49761 638 aaKnown RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 CLEC4DQ8WXI8 215 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TTLL2Q9BWV7 592 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF780BQ9Y6R6 833 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 LINC00032P0C843 101 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 UGT1A5P35504 534 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 ASPAP45381 313 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 GALNT3Q14435 633 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 HSDL1Q3SXM5 330 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TMPRSS11AQ6ZMR5 421 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 TMEM199Q8N511 208 aa11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 GLIS2Q9BZE0 524 aaPredicted RBP11.97□□□□□ -0.49
CDC42BPA-203ENST00000366766 PRG2P13727 222 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 SLC7A1P30825 629 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 ABL2P42684 1182 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 SRSF11Q05519 484 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 FGFBP2Q9BYJ0 223 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 OSBPL2Q9H1P3 480 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 KLHL1Q9NR64 748 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 HERVK_113P63132 956 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 QPRTQ15274 297 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 RAET1GQ6H3X3 334 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 DQX1Q8TE96 717 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 ASB9Q96DX5 294 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF347Q96SE7 839 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 ERVK-6Q9BXR3 956 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 NOL11Q9H8H0 719 aaKnown RBP11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 IL1RAPQ9NPH3 570 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 CHKBQ9Y259 395 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 HES2Q9Y543 173 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZBTB2Q8N680 514 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 UBR7Q8N806 425 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 KLHL31Q9H511 634 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 CALML5Q9NZT1 146 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 A0A0G2JLL6 359 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 PRRT2Q7Z6L0 340 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 RIT1Q92963 219 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 OMDQ99983 421 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 LMAN2LQ9H0V9 348 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 KCNU1A8MYU2 1149 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 KERAO60938 352 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 RFX3P48380 749 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 GMFBP60983 142 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 PLEKHG4BQ96PX9 1271 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 ZNF624Q9P2J8 865 aaPredicted RBP11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 FZD10Q9ULW2 581 aa11.96□□□□□ -0.49
CDC42BPA-203ENST00000366766 AP3D1O14617 1153 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 BANF1O75531 89 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 LAG3P18627 525 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 PFKPQ01813 784 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 SPIBQ01892 262 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 GNA12Q03113 381 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 CES5AQ6NT32 575 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 BNIPLQ7Z465 357 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 PNPOQ9NVS9 261 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 NUP214P35658 2090 aaPredicted RBP11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 CACNB4O00305 520 aaPredicted RBP11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 FFAR3O14843 346 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 GPR42O15529 346 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 OR6A2O95222 327 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 C1RP00736 705 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 CDCA2Q69YH5 1023 aaPredicted RBP11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 ZZZ3Q8IYH5 903 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 ARL10Q8N8L6 244 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 DCAKDQ8WVC6 231 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 ANKRD49Q8WVL7 239 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 FEM1CQ96JP0 617 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 WEE1P30291 646 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 MTHFRP42898 656 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 MAPK11Q15759 364 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 DEFB128Q7Z7B8 93 aa11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 TFB2MQ9H5Q4 396 aaKnown RBP11.96□□□□□ -0.5
CDC42BPA-203ENST00000366766 SLC25A14O95258 325 aaPredicted RBP11.95□□□□□ -0.5
CDC42BPA-203ENST00000366766 RPS9P46781 194 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms