RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 MRGPRX1Q96LB2 322 aa12.16□□□□□ -0.46
CAPN9-203ENST00000366666 LTB4R2Q9NPC1 389 aa12.16□□□□□ -0.46
CAPN9-203ENST00000366666 IRAK4Q9NWZ3 460 aa12.16□□□□□ -0.46
CAPN9-203ENST00000366666 A0A1W2PQ67 120 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 H7C0S8 307 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 MAN2B1O00754 1011 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
CAPN9-203ENST00000366666 MMP20O60882 483 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 NDUFV2P19404 249 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 SPINT3P49223 89 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 NEK3P51956 506 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 STARD6P59095 220 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 ROR2Q01974 943 aaKnown RBP12.15□□□□□ -0.46
CAPN9-203ENST00000366666 ARHGEF7Q14155 803 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 STARD3Q14849 445 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 CRY1Q16526 586 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 TBC1D25Q3MII6 688 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 FBXO43Q4G163 708 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 ZNF776Q68DI1 518 aaPredicted RBP12.15□□□□□ -0.46
CAPN9-203ENST00000366666 CBARPQ8N350 705 aaPredicted RBP12.15□□□□□ -0.46
CAPN9-203ENST00000366666 HDDC3Q8N4P3 179 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 MSANTD3Q96H12 275 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 PPP1R16AQ96I34 528 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 LRRC37BQ96QE4 947 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 RBBP8Q99708 897 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 MYLK2Q9H1R3 596 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 CAB39LQ9H9S4 337 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 DYRK4Q9NR20 520 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 CATSPERZQ9NTU4 200 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 MMP17Q9ULZ9 603 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 TRIM33Q9UPN9 1127 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 CRYL1Q9Y2S2 319 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 MTO1Q9Y2Z2 717 aaKnown RBP12.15□□□□□ -0.46
CAPN9-203ENST00000366666 LRRC42Q9Y546 428 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 IKBKGQ9Y6K9 419 aa12.15□□□□□ -0.46
CAPN9-203ENST00000366666 TCRBV21S2A2A0A5A6 115 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 KANSL1LA0AUZ9 987 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 FAM170BA6NMN3 283 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 TRIM49D1C9J1S8 452 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 RNASEH2AO75792 299 aaKnown RBP12.15□□□□□ -0.47
CAPN9-203ENST00000366666 PRAMEF1O95521 474 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 S1PR4O95977 384 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 TOP3BO95985 862 aaKnown RBP12.15□□□□□ -0.47
CAPN9-203ENST00000366666 GNAZP19086 355 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 CALB2P22676 271 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 GP5P40197 560 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 PRKCQQ04759 706 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 LAMB3Q13751 1172 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 CHRNA6Q15825 494 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 PDK4Q16654 411 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 ZRANB3Q5FWF4 1079 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 WASHC2DQ5SRD0 308 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 ARMC3Q5W041 872 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 ZNF449Q6P9G9 518 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 TRIM67Q6ZTA4 783 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 ZC3HC1Q86WB0 502 aaKnown RBP12.15□□□□□ -0.47
CAPN9-203ENST00000366666 KIRREL3Q8IZU9 778 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 NDUFAF2Q8N183 169 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 FUBP1Q96AE4 644 aaKnown RBP12.15□□□□□ -0.47
CAPN9-203ENST00000366666 NDNQ99608 321 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 CPNE1Q99829 537 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 HDAC8Q9BY41 377 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 RNPEPL1Q9HAU8 725 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 FBXL12Q9NXK8 326 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 ZNF180Q9UJW8 692 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 TMPRSS11EQ9UL52 423 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 FADS3Q9Y5Q0 445 aa12.15□□□□□ -0.47
CAPN9-203ENST00000366666 OR1I1O60431 355 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 RNASEH1O60930 286 aaKnown RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 SRP72O76094 671 aaKnown RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 ALDOAP04075 364 aaKnown RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 ITGA2BP08514 1039 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 ELFN1P0C7U0 828 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 CYP2A6P11509 494 aaPredicted RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 GABRG2P18507 467 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 KRT15P19012 456 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 C5AR1P21730 350 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 PEX19P40855 299 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 HADHAP40939 763 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 PDE1BQ01064 536 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 RBM20Q5T481 1227 aaKnown RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 ERAP2Q6P179 960 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 AFTPHQ6ULP2 937 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 FAM124AQ86V42 546 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 GJD3Q8N144 294 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 C4orf33Q8N1A6 199 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 ZNF398Q8TD17 642 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 UTP4Q969X6 686 aaKnown RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 VPS39Q96JC1 886 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 FAM167BQ9BTA0 163 aa12.14□□□□□ -0.47
CAPN9-203ENST00000366666 SSU72Q9NP77 194 aaKnown RBP12.14□□□□□ -0.47
CAPN9-203ENST00000366666 GLYATL1P3A0A0U1RQE8 302 aa12.13□□□□□ -0.47
CAPN9-203ENST00000366666 PRR23AA6NEV1 266 aa12.13□□□□□ -0.47
CAPN9-203ENST00000366666 NEMP1O14524 444 aa12.13□□□□□ -0.47
CAPN9-203ENST00000366666 EDF1O60869 148 aaKnown RBP12.13□□□□□ -0.47
CAPN9-203ENST00000366666 RFPL1O75677 317 aa12.13□□□□□ -0.47
CAPN9-203ENST00000366666 ADH1BP00325 375 aa12.13□□□□□ -0.47
CAPN9-203ENST00000366666 ATP13A5Q4VNC0 1218 aa12.13□□□□□ -0.47
CAPN9-203ENST00000366666 FASTKD1Q53R41 847 aaKnown RBP12.13□□□□□ -0.47
CAPN9-203ENST00000366666 FAM46CQ5VWP2 391 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms