RNA–Protein interactions for RNA: ENST00000365287.1

RNU4-11P-201, Transcript of RNA, U4 small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4-11P, Length 132 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-11P-201ENST00000365287 LSMEM2Q8N112 164 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 CPXM2Q8N436 756 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 ZNF843Q8N446 348 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 SPATA6LQ8N4H0 392 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 SCAMP5Q8TAC9 235 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 STYXQ8WUJ0 223 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 KTI12Q96EK9 354 aaPredicted RBP1□□□□□ -2.25
RNU4-11P-201ENST00000365287 MASTLQ96GX5 879 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 MAGED4Q96JG8 741 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 B3GALT6Q96L58 329 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 GAL3ST4Q96RP7 486 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 SIN3AQ96ST3 1273 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 RHNO1Q9BSD3 238 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 KRTAP4-1Q9BYQ7 146 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 APOBEC3GQ9HC16 384 aaKnown RBP1□□□□□ -2.25
RNU4-11P-201ENST00000365287 ECHDC1Q9NTX5 307 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 TCP11L1Q9NUJ3 509 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 NUDT4Q9NZJ9 180 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 MUTYHQ9UIF7 546 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 HIVEP2P31629 2446 aa1□□□□□ -2.25
RNU4-11P-201ENST00000365287 C5orf60A6NFR6 353 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 ANKRD66B4E2M5 251 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 BCAT2O15382 392 aaPredicted RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 SPINT2O43291 252 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 BUD23O43709 281 aaKnown RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 C22orf31O95567 290 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 ZSCAN5DPP0CG00 497 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 MTHFRP42898 656 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 PNLIPRP1P54315 467 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 DRP2Q13474 957 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 TCTN1Q2MV58 587 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 MYLK3Q32MK0 819 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 LRRC8EQ6NSJ5 796 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 VITQ6UXI7 678 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 ADCK1Q86TW2 530 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 SLC47A2Q86VL8 602 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 SLC35F3Q8IY50 421 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 OR2C3Q8N628 320 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 TMEM178AQ8NBL3 297 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 ZFAND2BQ8WV99 257 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 SEMA4DQ92854 862 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 SH3KBP1Q96B97 665 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 PHF21AQ96BD5 680 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 RNFT2Q96EX2 444 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 PRMT6Q96LA8 375 aaPredicted RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 EIF2AK1Q9BQI3 630 aaKnown RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 SARGQ9BW04 601 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 CLEC7AQ9BXN2 247 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 PABPC3Q9H361 631 aaKnown RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 NDST4Q9H3R1 872 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 MAGEE1Q9HCI5 957 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 GPR108Q9NPR9 543 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 HINT3Q9NQE9 182 aaKnown RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 RNF186Q9NXI6 227 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 DACT1Q9NYF0 836 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 CTSZQ9UBR2 303 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 PADI3Q9ULW8 664 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 THRAP3Q9Y2W1 955 aaKnown RBP0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 PCDHGB2Q9Y5G2 931 aa0.99□□□□□ -2.25
RNU4-11P-201ENST00000365287 IGHV4-61A0A0C4DH41 118 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 ACOD1A6NK06 481 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 SH2D7A6NKC9 451 aaPredicted RBP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 H0Y9J4 135 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 PLK4O00444 970 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 NXPH2O95156 264 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 CSPG5O95196 566 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 HPRP00739 348 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 NGFP01138 241 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 IGHV4-59P01825 116 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 FOLR2P14207 255 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 GP9P14770 177 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 NR2F2P24468 414 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 SP3Q02447 781 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 CHRNDQ07001 517 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 PTK2BQ14289 1009 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 SPARCL1Q14515 664 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 HLTFQ14527 1009 aaKnown RBP eCLIP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 SMAD1Q15797 465 aaKnown RBP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 DECR1Q16698 335 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 PRR30Q53SZ7 412 aaPredicted RBP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 ODR4Q5SWX8 454 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 WLSQ5T9L3 541 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 ZNF280DQ6N043 979 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 C17orf99Q6UX52 265 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 PLXDC2Q6UX71 529 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 MOB3CQ70IA8 216 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 MAP7D3Q8IWC1 876 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 RAVER1Q8IY67 606 aaKnown RBP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 ZBED8Q8IZ13 594 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 MYO1HQ8N1T3 1032 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 ACVR1CQ8NER5 493 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 RAB40AQ8WXH6 277 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 ORAI1Q96D31 301 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 C1orf147Q96MC9 270 aaPredicted RBP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 USP28Q96RU2 1077 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 SDHCQ99643 169 aaPredicted RBP0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 SLITRK2Q9H156 845 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 LRMDAQ9H2I8 198 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 TNFRSF19Q9NS68 423 aa0.98□□□□□ -2.25
RNU4-11P-201ENST00000365287 COQ3Q9NZJ6 369 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms