RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 MAP7D2Q96T17 732 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 LRRC1Q9BTT6 524 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 LRMDAQ9H2I8 198 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 IRAK4Q9NWZ3 460 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 KLHL9Q9P2J3 617 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 PGAP2Q9UHJ9 254 aa4.34□□□□□ -1.71
RNU4-28P-201ENST00000364739 RUSC2Q8N2Y8 1516 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 PRAG1Q86YV5 1406 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 A0A1W2PRG0 241 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 CTAGE9A4FU28 777 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 PLEKHD1A6NEE1 506 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 HS3ST1O14792 307 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 EIF3DO15371 548 aaKnown RBP eCLIP4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 CREB3O43889 395 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 PAK4O96013 591 aaPredicted RBP4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 CTAGE8P0CG41 777 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 FAM106CPP0CH98 169 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 UGT1A1P22309 533 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 UBA1P22314 1058 aaKnown RBP4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 HOXC9P31274 260 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 UBA7P41226 1012 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 PITX1P78337 314 aaPredicted RBP4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 KRTCAP3Q53RY4 240 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 JAKMIP3Q5VZ66 844 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 CTAGE4Q8IX94 777 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 METTL27Q8N6F8 245 aaPredicted RBP4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 FRMD1Q8N878 549 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 NAXEQ8NCW5 288 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 FAM149B1Q96BN6 582 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 ARHGEF26Q96DR7 871 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 PPM1MQ96MI6 270 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 TCP11L1Q9NUJ3 509 aa4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 LIMA1Q9UHB6 759 aaKnown RBP4.33□□□□□ -1.72
RNU4-28P-201ENST00000364739 ARHGEF40Q8TER5 1519 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZCWPW2A0A1B0GU75 182 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 KCNN4O15554 427 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 PLPP2O43688 288 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 SLC25A12O75746 678 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 TBX18O95935 607 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 ICAM1P05362 532 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 CLEC3BP05452 202 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 CD53P19397 219 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 NFKBIAP25963 317 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 KRT9P35527 623 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 FASLGP48023 281 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 ARCN1P48444 511 aaKnown RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 GALCP54803 685 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 EEF1A1P68104 462 aaKnown RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 PNLIPRP3Q17RR3 467 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 MRGPRG-AS1Q2M3A8 158 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 ZNF805Q5CZA5 627 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 EEF1A1P5Q5VTE0 462 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 PAPD4Q6PIY7 484 aaKnown RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 GSG1LQ6UXU4 331 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 CLEC17AQ6ZS10 378 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 RASGEF1CQ8N431 466 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 RBM15BQ8NDT2 890 aaKnown RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 OR1J2Q8NGS2 313 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 OR8K5Q8NH50 307 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 UTP15Q8TED0 518 aaKnown RBP4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 EGLN2Q96KS0 407 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 NEURL2Q9BR09 285 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 PDZD7Q9H5P4 517 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 STK39Q9UEW8 545 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 GAB2Q9UQC2 676 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 B3GALT5Q9Y2C3 310 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 TMEM98Q9Y2Y6 226 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 KIAA1210Q9ULL0 1709 aa4.32□□□□□ -1.72
RNU4-28P-201ENST00000364739 A0A1W2PP11 408 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 C5orf60A6NFR6 353 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 EIF4E1BA6NMX2 242 aaKnown RBP4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 PRSS47A8MTI9 375 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 TMEM178BH3BS89 294 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 WISP2O76076 250 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 IPO7O95373 1038 aaKnown RBP4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 CD4P01730 458 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 RARGP13631 454 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 PRCPP42785 496 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 GLIPR1P48060 266 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 CD81P60033 236 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 MPP1Q00013 466 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 NAB2Q15742 525 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 PMS2CLQ68D20 193 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 LCN10Q6JVE6 187 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 SEPT14Q6ZU15 432 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 DGLUCYQ7Z3D6 616 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 TDRD7Q8NHU6 1098 aaKnown RBP4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 THAP6Q8TBB0 222 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 UCMAQ8WVF2 138 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 FBXO17Q96EF6 278 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 HES6Q96HZ4 224 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 ST6GAL2Q96JF0 529 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 SEMA3CQ99985 751 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 MTMR10Q9NXD2 777 aa4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 MARCH4Q9P2E8 410 aaPredicted RBP4.31□□□□□ -1.72
RNU4-28P-201ENST00000364739 OR5K3A6NET4 321 aa4.3□□□□□ -1.72
RNU4-28P-201ENST00000364739 J3KRW8 73 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms