RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 GPNMBQ14956 572 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 KIF19Q2TAC6 998 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 PITRM1Q5JRX3 1037 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 WSCD1Q658N2 575 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 KIAA0408Q6ZU52 694 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 BNIPLQ7Z465 357 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 CTU1Q7Z7A3 348 aaKnown RBP18.94■□□□□ 0.62
CMTM3-201ENST00000361909 MUL1Q969V5 352 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 SLC9A7Q96T83 725 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 CSF3RQ99062 836 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 CPNE5Q9HCH3 593 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 IGSF5Q9NSI5 407 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 TMEM161AQ9NX61 479 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 PCDHA9Q9Y5H5 950 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 BRCA2P51587 3418 aa18.94■□□□□ 0.62
CMTM3-201ENST00000361909 CASTOR2A6NHX0 329 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 SLC22A1O15245 554 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 ZBTB24O43167 697 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 MSI1O43347 362 aaKnown RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 BCAS1O75363 584 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 NCAM1P13591 858 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 PAMP19021 973 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 CD68P34810 354 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 MNX1P50219 401 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 EEFSECP57772 596 aaKnown RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 CDC20Q12834 499 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 TTC23Q5W5X9 447 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 FBXO46Q6PJ61 603 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 OSTM1Q86WC4 334 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 PROSER1Q86XN7 944 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 SPARTQ8N0X7 666 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 ATP6V0D2Q8N8Y2 350 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 B3GALNT2Q8NCR0 500 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 C3orf58Q8NDZ4 430 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 GABPB2Q8TAK5 448 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 LRRC58Q96CX6 371 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 L3HYPDHQ96EM0 354 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 TSPAN17Q96FV3 270 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 ELMO2Q96JJ3 720 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 MTRRQ9UBK8 725 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 EGFL7Q9UHF1 273 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 STAP1Q9ULZ2 295 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 INPP4BO15327 924 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 TULP3O75386 442 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 YAP1P46937 504 aaKnown RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 MRPL19P49406 292 aaKnown RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 ZNF135P52742 658 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 RAD23AP54725 363 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 CD300CQ08708 224 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 SLC16A12Q6ZSM3 486 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 C8orf59Q8N0T1 100 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 CLEC4CQ8WTT0 213 aa18.93■□□□□ 0.62
CMTM3-201ENST00000361909 AURKBQ96GD4 344 aaPredicted RBP18.93■□□□□ 0.62
CMTM3-201ENST00000361909 PQBP1O60828 265 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 NFKB1P19838 968 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 GRK3P35626 688 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 KPNA1P52294 538 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 TAS2R39P59534 338 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ZNF33AQ06730 810 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 DAG1Q14118 895 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 PLCL1Q15111 1095 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 FXNQ16595 210 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 DCP1BQ8IZD4 617 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 C2CD4AQ8NCU7 369 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 PPHLN1Q8NEY8 458 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 DBF4BQ8NFT6 615 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 NT5C3BQ969T7 300 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 MUS81Q96NY9 551 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 PPP1R2P1Q96PQ5 205 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 FUNDC2Q9BWH2 189 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 GSTO2Q9H4Y5 243 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ALG2Q9H553 416 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 SP140LQ9H930 580 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ANKHQ9HCJ1 492 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 WARS2Q9UGM6 360 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 DSEQ9UL01 958 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 NAALAD2Q9Y3Q0 740 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ZNF638Q14966 1978 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ENPP3O14638 875 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 B3GAT3O94766 335 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 KCNH1O95259 989 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 CYP11A1P05108 521 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 LTA4HP09960 611 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ALDOCP09972 364 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 CPB1P15086 417 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 IMPDH1P20839 514 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ARSFP54793 590 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 NFKB2Q00653 900 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ILF2Q12905 390 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 SPCS2Q15005 226 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ACAP2Q15057 778 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 MAPRE1Q15691 268 aaKnown RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 ARL13BQ3SXY8 428 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 NOMO2Q5JPE7 1267 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 CHST15Q7LFX5 561 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-201ENST00000361909 LACC1Q8IV20 430 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 CLYBLQ8N0X4 340 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 NTAN1Q96AB6 310 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 TMEM125Q96AQ2 219 aa18.92■□□□□ 0.62
CMTM3-201ENST00000361909 KCTD14Q9BQ13 255 aaPredicted RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms