RNA–Protein interactions for RNA: ENST00000359526.8

DNMT1-202, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene DNMT1, Length 5,206 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-202ENST00000359526 PRKAR1AP10644 381 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 ADAM17P78536 824 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 ELP6Q0PNE2 266 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 KLHL32Q96NJ5 620 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 SMPD3Q9NY59 655 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-202ENST00000359526 PRELID1Q9Y255 219 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 SAGE2PA6NJ88 616 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 BTN3A3O00478 584 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 KPNA3O00505 521 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-202ENST00000359526 PIAS1O75925 651 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 SMPD1P17405 629 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 MC4RP32245 332 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 MAPKAPK2P49137 400 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 COPZ1P61923 177 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 COL9A3Q14050 684 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-202ENST00000359526 KLHL35Q6PF15 583 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 AVL9Q8NBF6 648 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 COPS5Q92905 334 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 CENPNQ96H22 339 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-202ENST00000359526 CITED4Q96RK1 184 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 PDGFDQ9GZP0 370 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-202ENST00000359526 RACGAP1Q9H0H5 632 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 EGFL7Q9UHF1 273 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 POLR3HQ9Y535 204 aaPredicted RBP12.16□□□□□ -0.46
DNMT1-202ENST00000359526 PTPRJQ12913 1337 aa12.16□□□□□ -0.46
DNMT1-202ENST00000359526 ATP6AP2A0A1C7CYW4 349 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 UBE2QL1A1L167 161 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TMCC2O75069 709 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 ATP6AP2O75787 350 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 NR2F6P10588 404 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 PTPN2P17706 415 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 ARF4P18085 180 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 RAB15P59190 212 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 ZNHIT3Q15649 155 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 GLYATQ6IB77 296 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 BEND7Q8N7W2 519 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 SLC22A17Q8WUG5 538 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 BTN2A3PQ96KV6 586 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 BUD23O43709 281 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 PAGE1O75459 146 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 HDCP19113 662 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 GNPDA1P46926 289 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TIGD2Q4W5G0 525 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 PYDC2Q56P42 97 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 FAM220AQ7Z4H9 259 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 FNDC11Q9BVV2 318 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 CADM1Q9BY67 442 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 PCDH12Q9NPG4 1184 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 PTGFRNQ9P2B2 879 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TSPAN1O60635 241 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 OR6A2O95222 327 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 ECDO95905 644 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TSPAN8P19075 237 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 EPORP19235 508 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 SLC6A2P23975 617 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 MYL9P24844 172 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 WEE1P30291 646 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 ASTE1Q2TB18 679 aaPredicted RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 LRRC17Q8N6Y2 441 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 WDR48Q8TAF3 677 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 BRI3BPQ8WY22 251 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 LPGAT1Q92604 370 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 CLPTM1LQ96KA5 538 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 COPS8Q99627 209 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 CRISPLD1Q9H336 500 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 AASDHPPTQ9NRN7 309 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TMPRSS4Q9NRS4 437 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 NUDT4Q9NZJ9 180 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 GTF2IRD1Q9UHL9 959 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 COQ6Q9Y2Z9 468 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 CCDC162PA2VCL2 907 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 SOWAHBA6NEL2 793 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 NR2F1P10589 423 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 HTR1BP28222 390 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 RPL26P61254 145 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 CXXC5Q7LFL8 322 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 SLCO6A1Q86UG4 719 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 SVOPLQ8N434 492 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 SPATA6LQ8N4H0 392 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TEX47Q8TBZ9 253 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 OVCA2Q8WZ82 227 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 CLP1Q92989 425 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 NXF3Q9H4D5 531 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 TLE6Q9H808 572 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 RBPJLQ9UBG7 517 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 WBP11Q9Y2W2 641 aaKnown RBP12.15□□□□□ -0.46
DNMT1-202ENST00000359526 HES2Q9Y543 173 aa12.15□□□□□ -0.46
DNMT1-202ENST00000359526 PRMT5O14744 637 aaPredicted RBP12.14□□□□□ -0.47
DNMT1-202ENST00000359526 MFSD11O43934 449 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 CCNKO75909 580 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 SCELO95171 688 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 PKMP14618 531 aaKnown RBP12.14□□□□□ -0.47
DNMT1-202ENST00000359526 ZNF12P17014 697 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 ACLYP53396 1101 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 MBTD1Q05BQ5 628 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 LGALS3BPQ08380 585 aa12.14□□□□□ -0.47
DNMT1-202ENST00000359526 BICRALQ6AI39 1079 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms