RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 NUS1Q96E22 293 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PDXPQ96GD0 296 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ATXN7L3BQ96GX2 97 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ASB8Q9H765 288 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 FGF22Q9HCT0 170 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PREBQ9HCU5 417 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 FBXO6Q9NRD1 293 aaPredicted RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 IARS2Q9NSE4 1012 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 C20orf96Q9NUD7 363 aaPredicted RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 ATXN10Q9UBB4 475 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CTNNAL1Q9UBT7 734 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PILRBQ9UKJ0 227 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TRBV5-4A0A0C4DH59 114 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 OR2AG2A6NM03 316 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 H7C0S8 307 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PSMD3O43242 534 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 SLC7A4O43246 635 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 RIPK2O43353 540 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CRTAMO95727 393 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TOP3BO95985 862 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 MYF5P13349 255 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZNF8P17098 575 aaPredicted RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 PGAM1P18669 254 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TGM1P22735 817 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 HSD17B3P37058 310 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 DPTQ07507 201 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 SGCGQ13326 291 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 SIM2Q14190 667 aaPredicted RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZNF460Q14592 562 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZRANB3Q5FWF4 1079 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 RBM20Q5T481 1227 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 GPRC6AQ5T6X5 926 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 RAET1GQ6H3X3 334 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NEPROQ6NW34 567 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 DOK6Q6PKX4 331 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CYP2U1Q7Z449 544 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ABI3BPQ7Z7G0 1075 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 C11orf96Q7Z7L8 435 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ADGRG6Q86SQ4 1221 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 SERPINA9Q86WD7 417 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CILP2Q8IUL8 1156 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 RGL4Q8IZJ4 473 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 RBFAQ8N0V3 343 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NDUFAF2Q8N183 169 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 OTUD6BQ8N6M0 293 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CADM4Q8NFZ8 388 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TMEM131Q92545 1883 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 COX14Q96I36 57 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZC3H10Q96K80 434 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 TEX101Q9BY14 249 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NFS1Q9Y697 457 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 A0A1B0GVT2 93 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 LRRC72A6NJI9 287 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CD3EAPO15446 510 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 NDUFS2O75306 463 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 SASH3O75995 380 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 POLBP06746 335 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CYP2A6P11509 494 aaPredicted RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZNF30P17039 623 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CA4P22748 312 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NFKBIAP25963 317 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TNFRSF8P28908 595 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 MAGEA9P43362 315 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NUBP1P53384 320 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PMS2P54278 862 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CDK3Q00526 305 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CCDC15Q0P6D6 951 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 BNIP3Q12983 259 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 EIF2B5Q13144 721 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 FZD2Q14332 565 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 SHBQ15464 509 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZNF528Q3MIS6 628 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZNF470Q6ECI4 717 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NEK5Q6P3R8 708 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TMEM207Q6UWW9 146 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CEP68Q76N32 757 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 RELL1Q8IUW5 271 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 KRT222Q8N1A0 295 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 BTN2A2Q8WVV5 523 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 OR1E3Q8WZA6 343 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PIGKQ92643 395 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 CERS2Q96G23 380 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 NDNQ99608 321 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 APOOQ9BUR5 198 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 C1QTNF1Q9BXJ1 281 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 OR2AG1Q9H205 316 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ARRDC1-AS1Q9H2J1 176 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 KDM4CQ9H3R0 1056 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 TRABDQ9H4I3 376 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PRM3Q9NNZ6 103 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PPANQ9NQ55 473 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 GPR27Q9NS67 375 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 UCKL1Q9NWZ5 548 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 PKP3Q9Y446 797 aa3.99□□□□□ -1.77
LIG4-201ENST00000356922 ZNF106Q9H2Y7 1883 aaKnown RBP3.99□□□□□ -1.77
LIG4-201ENST00000356922 A0A1W2PQ67 120 aa3.98□□□□□ -1.77
LIG4-201ENST00000356922 GDF9O60383 454 aa3.98□□□□□ -1.77
LIG4-201ENST00000356922 SLC25A14O95258 325 aaPredicted RBP3.98□□□□□ -1.77
LIG4-201ENST00000356922 H2AFXP16104 143 aaPredicted RBP3.98□□□□□ -1.77
LIG4-201ENST00000356922 CREB1P16220 341 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms