RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 LIPMQ5VYY2 423 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 PTRHD1Q6GMV3 140 aaKnown RBP13.78□□□□□ -0.2
LSS-201ENST00000356396 RGS9BPQ6ZS82 235 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 CYS1Q717R9 158 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 NPAS2Q99743 824 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 DENND2DQ9H6A0 471 aaPredicted RBP13.78□□□□□ -0.2
LSS-201ENST00000356396 PRDM16Q9HAZ2 1276 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 MID1IP1Q9NPA3 183 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 NLE1Q9NVX2 485 aaPredicted RBP13.78□□□□□ -0.2
LSS-201ENST00000356396 RNF112Q9ULX5 631 aa13.78□□□□□ -0.2
LSS-201ENST00000356396 VGLL3A8MV65 326 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 IL1BP01584 269 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 MTHFD2P13995 350 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 EEF1DP29692 281 aaKnown RBP13.77□□□□□ -0.2
LSS-201ENST00000356396 HTR7P34969 479 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 SLC18A1P54219 525 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 PHKG1Q16816 387 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 C2orf27AQ580R0 203 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 ZYG11AQ6WRX3 759 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 HSD11B1LQ7Z5J1 315 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 CCDC91Q7Z6B0 441 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 SDCCAG8Q86SQ7 713 aaPredicted RBP13.77□□□□□ -0.2
LSS-201ENST00000356396 LRRC49Q8IUZ0 686 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 CNTN4Q8IWV2 1026 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 NPAS3Q8IXF0 933 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 STK40Q8N2I9 435 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 FIBINQ8TAL6 211 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 OVCA2Q8WZ82 227 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 HERVK_113Q902F9 699 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 PBXIP1Q96AQ6 731 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 PRKD2Q9BZL6 878 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 SLC28A3Q9HAS3 691 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 SAR1AQ9NR31 198 aa13.77□□□□□ -0.2
LSS-201ENST00000356396 A0A0J9YYE9 177 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 ECI2O75521 394 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 RASSF9O75901 435 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 TRBC1P01850 177 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 AKT1P31749 480 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 LTBP2Q14767 1821 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 TAF1AQ15573 450 aaPredicted RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 SF1Q15637 639 aaKnown RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 MYLK3Q32MK0 819 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 ACSBG2Q5FVE4 666 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 MMAAQ8IVH4 418 aaKnown RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 PCDH20Q8N6Y1 951 aaKnown RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 LRCH3Q96II8 777 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 C7orf26Q96N11 449 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 PLEKHG4BQ96PX9 1271 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 CDH19Q9H159 772 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 NSUN3Q9H649 340 aaKnown RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 ZBTB26Q9HCK0 441 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 TBC1D3BA6NDS4 549 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 HEPACAM2A8MVW5 462 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 DCTN3O75935 186 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 UGP2Q16851 508 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 LACTB2Q53H82 288 aaPredicted RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 AARSD1Q9BTE6 412 aaKnown RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 SPATA16Q9BXB7 569 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 HACD3Q9P035 362 aa13.77□□□□□ -0.21
LSS-201ENST00000356396 CFAP20Q9Y6A4 193 aaKnown RBP13.77□□□□□ -0.21
LSS-201ENST00000356396 COL4A3Q01955 1670 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 PEX11AO75192 247 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 CASP2P42575 452 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 POU4F1Q01851 419 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 SULT2A1Q06520 285 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 CCDC153Q494R4 210 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 PARM1Q6UWI2 310 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 CUZD1Q86UP6 607 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 PARP9Q8IXQ6 854 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 CDYL2Q8N8U2 506 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 PPFIBP2Q8ND30 876 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 FLCNQ8NFG4 579 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 ACMSDQ8TDX5 336 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 SEZ6LQ9BYH1 1024 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 ILKAPQ9H0C8 392 aaPredicted RBP13.76□□□□□ -0.21
LSS-201ENST00000356396 SUV39H2Q9H5I1 410 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 TCF7L2Q9NQB0 619 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 CD274Q9NZQ7 290 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 ARHGAP26Q9UNA1 814 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 GFRA2O00451 464 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 KRT36O76013 467 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 ENO3P13929 434 aaPredicted RBP13.76□□□□□ -0.21
LSS-201ENST00000356396 POLR2EP19388 210 aaKnown RBP13.76□□□□□ -0.21
LSS-201ENST00000356396 IGFBP4P22692 258 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 PREPP48147 710 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 HSPA7P48741 367 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 ZNF77Q15935 545 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 DOK6Q6PKX4 331 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 SPDYE1Q8NFV5 336 aaPredicted RBP13.76□□□□□ -0.21
LSS-201ENST00000356396 MCUR1Q96AQ8 359 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 GRAMD1AQ96CP6 724 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 UBXN10Q96LJ8 280 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 DONSONQ9NYP3 566 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 TMPRSS11EQ9UL52 423 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 GBF1Q92538 1859 aa13.76□□□□□ -0.21
LSS-201ENST00000356396 FZD6O60353 706 aa13.75□□□□□ -0.21
LSS-201ENST00000356396 IPO13O94829 963 aaKnown RBP13.75□□□□□ -0.21
LSS-201ENST00000356396 IGSF6O95976 241 aa13.75□□□□□ -0.21
LSS-201ENST00000356396 PKMP14618 531 aaKnown RBP13.75□□□□□ -0.21
LSS-201ENST00000356396 DGKGP49619 791 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms