RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 PIGNO95427 931 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 CHRNA1P02708 482 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 PIRTP0C851 137 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 GRIA4P48058 902 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 PDZK1Q5T2W1 519 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 PRSS55Q6UWB4 352 aaPredicted RBP11.21□□□□□ -0.62
FN1-204ENST00000356005 RNF145Q96MT1 663 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 NDNQ99608 321 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 HDHD2Q9H0R4 259 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 C8orf33Q9H7E9 229 aaPredicted RBP11.21□□□□□ -0.62
FN1-204ENST00000356005 NMUR1Q9HB89 426 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 FFAR3O14843 346 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 GPR42O15529 346 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 NTRK1P04629 796 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 ALPIP09923 528 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 CCKBRP32239 447 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 SLC13A2Q13183 592 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 DQX1Q8TE96 717 aaKnown RBP11.21□□□□□ -0.62
FN1-204ENST00000356005 CLCC1Q96S66 551 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 NTPCRQ9BSD7 190 aaKnown RBP11.21□□□□□ -0.62
FN1-204ENST00000356005 CKLFQ9UBR5 152 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 MTF2Q9Y483 593 aaPredicted RBP11.21□□□□□ -0.62
FN1-204ENST00000356005 STON1Q9Y6Q2 735 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 TAF4O00268 1085 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 CYB5AP00167 134 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 SLC10A3P09131 477 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 HNRNPA1P09651 372 aaKnown RBP eCLIP11.21□□□□□ -0.623e-7■□□□□ 8.3
FN1-204ENST00000356005 MAT2AP31153 395 aaKnown RBP11.21□□□□□ -0.62
FN1-204ENST00000356005 LPIN1Q14693 890 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 DLG2Q15700 870 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 CPSF6Q16630 551 aaKnown RBP eCLIP11.21□□□□□ -0.62
FN1-204ENST00000356005 C1orf127Q8N9H9 656 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 ACAT2Q9BWD1 397 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 SERTAD3Q9UJW9 196 aa11.21□□□□□ -0.62
FN1-204ENST00000356005 FAM86C2PA6NEL3 165 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 WTIPA6NIX2 430 aaPredicted RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 OR4Q2P0C623 313 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SCNN1AP37088 669 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 CCR8P51685 355 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ITPRIPL2Q3MIP1 535 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 CARD16Q5EG05 197 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ARSHQ5FYA8 562 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 PIK3C3Q8NEB9 887 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 KLHL1Q9NR64 748 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SIRPGQ9P1W8 387 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 NPC1O15118 1278 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 JMJD7P0C870 316 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SLC7A2P52569 658 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 NRLP54845 237 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 DRG2P55039 364 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 RPL7AP62424 266 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 AMZ1Q400G9 498 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 UBXN11Q5T124 520 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 TRIQKQ629K1 86 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ENPP7Q6UWV6 458 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SAPCD2Q86UD0 394 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 MTDHQ86UE4 582 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 FAM98AQ8NCA5 519 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 OR52E6Q96RD3 313 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ELL3Q9HB65 397 aaPredicted RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 TMEM27Q9HBJ8 222 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SDHAF3Q9NRP4 125 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ADGRE2Q9UHX3 823 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 RP1L1Q8IWN7 2480 aaPredicted RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 VEGFDO43915 354 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 KERAO60938 352 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 CCNE2O96020 404 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 FAAP100Q0VG06 881 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ZNF792Q3KQV3 632 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SULT1C3Q6IMI6 304 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 PCDH20Q8N6Y1 951 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 ATXN2LQ8WWM7 1075 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 MTMR8Q96EF0 704 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ART5Q96L15 291 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ZMAT2Q96NC0 199 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 RETREG1Q9H6L5 497 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 C10orf88Q9H8K7 445 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 FER1L6Q2WGJ9 1857 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 FAM25AB3EWG3 89 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 FAM25CB3EWG5 89 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 FAM25GB3EWG6 89 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 MFN2O95140 757 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 AUHQ13825 339 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 P4HA3Q7Z4N8 544 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SLC9B2Q86UD5 537 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SLC30A8Q8IWU4 369 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 LGMNQ99538 433 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ACE2Q9BYF1 805 aaPredicted RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 TIPRLO75663 272 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 SOD2P04179 222 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 MAPK12P53778 367 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 ZNF155Q12901 538 aaPredicted RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 DGKKQ5KSL6 1271 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 PROSER1Q86XN7 944 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 XYLT1Q86Y38 959 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 CMTR2Q8IYT2 770 aaKnown RBP11.2□□□□□ -0.62
FN1-204ENST00000356005 FAM46DQ8NEK8 389 aa11.2□□□□□ -0.62
FN1-204ENST00000356005 PIWIL2Q8TC59 973 aaKnown RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms