RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 C16orf62Q7Z3J2 963 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 PDSS2Q86YH6 399 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 LZTR1Q8N653 840 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 CDYL2Q8N8U2 506 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 SMYD1Q8NB12 490 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 NACC2Q96BF6 587 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 ACTR8Q9H981 624 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 POLE4Q9NR33 117 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 VPS51Q9UID3 782 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 RABL2BQ9UNT1 228 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 NUMA1Q14980 2115 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 DNAJC25-GNG10A0A024R161 153 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 KRT87PA6NCN2 255 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 NOTOA8MTQ0 251 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 LOC110117498-PIK3R3F6TDL0 507 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 MSLNQ13421 630 aaPredicted RBP14□□□□□ -0.17
SREBF1-202ENST00000355815 ARHGEF7Q14155 803 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 INTS6LQ5JSJ4 861 aaKnown RBP14□□□□□ -0.17
SREBF1-202ENST00000355815 NEK5Q6P3R8 708 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 IL27RAQ6UWB1 636 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 CENPSQ8N2Z9 138 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 ENDOVQ8N8Q3 282 aaKnown RBP14□□□□□ -0.17
SREBF1-202ENST00000355815 ACVR1CQ8NER5 493 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 OR9I1Q8NGQ6 314 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 ZYG11BQ9C0D3 744 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 ADAMTS10Q9H324 1103 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 SOX17Q9H6I2 414 aaPredicted RBP14□□□□□ -0.17
SREBF1-202ENST00000355815 NMRK2Q9NPI5 230 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 CRLS1Q9UJA2 301 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 C3orf18Q9UK00 162 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 WBP11Q9Y2W2 641 aaKnown RBP14□□□□□ -0.17
SREBF1-202ENST00000355815 PTCH2Q9Y6C5 1203 aa14□□□□□ -0.17
SREBF1-202ENST00000355815 SEC22BO75396 215 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 HLA-DQB2P05538 268 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 NKX2-5P52952 324 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 RHOAP61586 193 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 LSAMPQ13449 338 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 PDCD4Q53EL6 469 aaKnown RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 AKIRIN2Q53H80 203 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 PRMT9Q6P2P2 845 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ZNF621Q6ZSS3 439 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 GET4Q7L5D6 327 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 C14orf80Q86SX3 495 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 PIM3Q86V86 326 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 YME1L1Q96TA2 773 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 UGT2B28Q9BY64 529 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 FBXO44Q9H4M3 255 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 EXD2Q9NVH0 621 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 H2AFY2Q9P0M6 372 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 CNTN3Q9P232 1028 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ZNF624Q9P2J8 865 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 WDR37Q9Y2I8 494 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 A0A0J9YVX5 310 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 A8MV72 311 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 H3BNX3 289 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 FGF3P11487 239 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ZNF12P17014 697 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ATF4P18848 351 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 CES1P23141 567 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ATP12AP54707 1039 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 NCF4Q15080 339 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 MED22Q15528 200 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 AARS2Q5JTZ9 985 aaKnown RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 TCAIMQ8N3R3 496 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 SETD9Q8NE22 299 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 SKA1Q96BD8 255 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 TEX12Q9BXU0 123 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 TRIM8Q9BZR9 551 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 TOR4AQ9NXH8 423 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ZNHIT2Q9UHR6 403 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ZNF221Q9UK13 617 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ADAMTS6Q9UKP5 1117 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 SPEF1Q9Y4P9 236 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 SQORQ9Y6N5 450 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 COL2A1P02458 1487 aaPredicted RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 A0A0J9YYE9 177 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 BTN3A3O00478 584 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 PTGESO14684 152 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 CNTN5O94779 1100 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 F2P00734 622 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 ITGAXP20702 1163 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 CUZD1Q86UP6 607 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 WDR12Q9GZL7 423 aaKnown RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 POLR1EQ9GZS1 481 aaKnown RBP13.99□□□□□ -0.17
SREBF1-202ENST00000355815 FETUBQ9UGM5 382 aa13.99□□□□□ -0.17
SREBF1-202ENST00000355815 FBP2O00757 339 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 VPS26AO75436 327 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 KRT6BP04259 564 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 ETV4P43268 484 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 RECQLP46063 649 aaPredicted RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 KRT6CP48668 564 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 TNK2Q07912 1038 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 POM121L1PQ3SYA9 428 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 MBLAC2Q68D91 279 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 PGAM4Q8N0Y7 254 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SCAIQ8N9R8 606 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 SMG8Q8ND04 991 aaKnown RBP13.98□□□□□ -0.17
SREBF1-202ENST00000355815 OR13C4Q8NGS5 318 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 RSPH1Q8WYR4 309 aa13.98□□□□□ -0.17
SREBF1-202ENST00000355815 GFM1Q96RP9 751 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms