RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 ATF7IP2Q5U623 682 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CEP68Q76N32 757 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 TAC4Q86UU9 113 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DEPDC4Q8N2C3 294 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DNAJB14Q8TBM8 379 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 TAF4BQ92750 862 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 RPGRIP1Q96KN7 1286 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SNX27Q96L92 541 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 NPY6RQ99463 290 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC39A8Q9C0K1 460 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SCUBE2Q9NQ36 999 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 A0A0B4J293 547 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 A0A1B0GVM2 712 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 WWP2O00308 870 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 B4GALT2O60909 372 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PSAPP07602 524 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CTSBP07858 339 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CD22P20273 847 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC6A2P23975 617 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PGM1P36871 562 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CCNG1P51959 295 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CNTN1Q12860 1018 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 AP5B1Q2VPB7 878 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 LIN52Q52LA3 116 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 KLHDC10Q6PID8 442 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PPP1R21Q6ZMI0 780 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 SUMF1Q8NBK3 374 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 ZNF669Q96BR6 464 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 ACCSQ96QU6 501 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PRMT8Q9NR22 394 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 STX18Q9P2W9 335 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 ZFP69BQ9UJL9 534 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 STARD13Q9Y3M8 1113 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 PRSS51A0A1B0GVH4 220 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 INSIG1O15503 277 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 NIPSNAP2O75323 286 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 TM7SF2O76062 418 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 EZRP15311 586 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 PRAMEP78395 509 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CDK16Q00536 496 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DSG1Q02413 1049 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CYP4Z1Q86W10 505 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 NME8Q8N427 588 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 MAL2Q969L2 176 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 TSPAN17Q96FV3 270 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CNBD2Q96M20 576 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 DPH2Q9BQC3 489 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC4A5Q9BY07 1137 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 LRRC3Q9BY71 257 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 CCSER2Q9H7U1 834 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 XAB2Q9HCS7 855 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 POLMQ9NP87 494 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 PRDM5Q9NQX1 630 aaPredicted RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 SLC39A10Q9ULF5 831 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 OAZ3Q9UMX2 235 aa5.6□□□□□ -1.51
CD47-201ENST00000355354 YARS2Q9Y2Z4 477 aaKnown RBP5.6□□□□□ -1.51
CD47-201ENST00000355354 A0A096LPI6 279 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 C15orf38-AP3S2A0A0A6YYH1 394 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 APOC4-APOC2K7ER74 178 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 OPA1O60313 960 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PRAMEF10O60809 474 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 DGAT1O75907 488 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 WISP3O95389 354 aaPredicted RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 APOC2P02655 101 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 C21orf33P30042 268 aaPredicted RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 DMP1Q13316 513 aaPredicted RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 SLMAPQ14BN4 828 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 CYTH1Q15438 398 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 SLC5A9Q2M3M2 681 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 ANKRD20A4Q4UJ75 823 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 TMEM31Q5JXX7 168 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 ARPINQ7Z6K5 226 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 MIB1Q86YT6 1006 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 GALNT15Q8N3T1 639 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 KRTCAP2Q8N6L1 136 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.59□□□□□ -1.51
CD47-201ENST00000355354 RSRC1Q96IZ7 334 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 MRGPRX2Q96LB1 330 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 SPATA33Q96N06 139 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 IQCGQ9H095 443 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 IRAK4Q9NWZ3 460 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PNMA8BQ9ULN7 279 aaPredicted RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 PRKAB1Q9Y478 270 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 A8MV72 311 aaPredicted RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 TNFRSF10BO14763 440 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 MAFKO60675 156 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 CDK14O94921 469 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 DDX5P17844 614 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 PAMP19021 973 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 HRH2P25021 359 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 SOX18P35713 384 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 GEMIN4P57678 1058 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 MRPS6P82932 125 aaKnown RBP5.59□□□□□ -1.51
CD47-201ENST00000355354 IFITM2Q01629 132 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 DPYSQ14117 519 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 GOLGA7BQ2TAP0 167 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 ANKRD54Q6NXT1 300 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 DNAJC24Q6P3W2 148 aa5.59□□□□□ -1.51
CD47-201ENST00000355354 PAQR6Q6TCH4 344 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms