RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 GABRDO14764 452 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 NCAM2O15394 837 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SEMA3DO95025 777 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 CELF2O95319 508 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 OR4Q2P0C623 313 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 GFAPP14136 432 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 POLR2IP36954 125 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 PSME3P61289 254 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 BNIPLQ7Z465 357 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SYTL1Q8IYJ3 562 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 RYBPQ8N488 228 aaPredicted RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 SNX19Q92543 992 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 TMEM246Q9BRR3 403 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SLC39A8Q9C0K1 460 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 HOXD1Q9GZZ0 328 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 UPF3AQ9H1J1 476 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 EFCAB1Q9HAE3 211 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PLSCR3Q9NRY6 295 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 IFT80Q9P2H3 777 aaPredicted RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 SNX2O60749 519 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 BCAS2O75934 225 aaPredicted RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 PARNO95453 639 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 CXCR3P49682 368 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 CDC42EP1Q00587 391 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 MERTKQ12866 999 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PRKAA1Q13131 559 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 ARHGEF6Q15052 776 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PXDC1Q5TGL8 231 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 AGAP7PQ5VUJ5 663 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PKN3Q6P5Z2 889 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 DDIASQ8IXT1 998 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 LSMEM2Q8N112 164 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 TXNDC5Q8NBS9 432 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 OR2T3Q8NH03 318 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 ADAMTS16Q8TE57 1224 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 HEXDCQ8WVB3 486 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 DLG3Q92796 817 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SDCCAG3Q96C92 435 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SMARCD1Q96GM5 515 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 ZNF347Q96SE7 839 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SLC9A7Q96T83 725 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 C1QTNF1Q9BXJ1 281 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 AP5M1Q9H0R1 490 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 ATP13A3Q9H7F0 1226 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 OAZ3Q9UMX2 235 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 ERI2A8K979 691 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 KMOO15229 486 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 MTSS1O43312 755 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 NDUFS2O75306 463 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PAGE1O75459 146 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 CABYRO75952 493 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 SLC4A1P02730 911 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 MSL3P1P0C860 447 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 HOXD8P13378 290 aaPredicted RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 IL7RP16871 459 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 DCKP27707 260 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 CRYBB1P53674 252 aaPredicted RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 RAB10P61026 200 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 LRIT3Q3SXY7 679 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 ABRAXAS1Q6UWZ7 409 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PLEKHG7Q6ZR37 379 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 TMEM151AQ8N4L1 468 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 OR6P1Q8NGX9 317 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PBXIP1Q96AQ6 731 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 PABPC5Q96DU9 382 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 KLHL5Q96PQ7 755 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 VPS35Q96QK1 796 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 BEX2Q9BXY8 128 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 LHPPQ9H008 270 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 EXD2Q9NVH0 621 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 DUS2Q9NX74 493 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 PSME2Q9UL46 239 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 CDH7Q9ULB5 785 aa9.33□□□□□ -0.92
SMG6-202ENST00000354901 COPG1Q9Y678 874 aaKnown RBP9.33□□□□□ -0.92
SMG6-202ENST00000354901 MAGEB16A2A368 324 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 CDK2AP1O14519 115 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 NRP2O60462 931 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 CLASP2O75122 1294 aaKnown RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 HLA-DQB2P05538 268 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ALOX5P09917 674 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ATF4P18848 351 aaPredicted RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 KCNA5P22460 613 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 LHX1P48742 406 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 STX1BP61266 288 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 PCID2Q5JVF3 399 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 HMBOX1Q6NT76 420 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 TTC23LQ6PF05 361 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ATP6V0D2Q8N8Y2 350 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ASCC1Q8N9N2 400 aaKnown RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 PPHLN1Q8NEY8 458 aaKnown RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 MAP6Q96JE9 813 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 FCRL2Q96LA5 508 aaPredicted RBP9.32□□□□□ -0.92
SMG6-202ENST00000354901 FERD3LQ96RJ6 166 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 PTPN18Q99952 460 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 ANKRD60Q9BZ19 345 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 RRAGCQ9HB90 399 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 MID2Q9UJV3 735 aa9.32□□□□□ -0.92
SMG6-202ENST00000354901 PDE4DIPQ5VU43 2346 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms