RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 HOPXQ9BPY8 73 aaPredicted RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 SOX17Q9H6I2 414 aaPredicted RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 CD274Q9NZQ7 290 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 EIF2B4Q9UI10 523 aaKnown RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 ASLP04424 464 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 PRKAR2AP13861 404 aaKnown RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 KCNK10P57789 538 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 TXNL4AP83876 142 aaKnown RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 C18orf21Q32NC0 220 aaPredicted RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 HACD2Q6Y1H2 254 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 CMTR2Q8IYT2 770 aaKnown RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 GPR150Q8NGU9 434 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 BHMTQ93088 406 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 FUBP1Q96AE4 644 aaKnown RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 GKN1Q9NS71 199 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 CCM2LQ9NUG4 571 aaPredicted RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 GID8Q9NWU2 228 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 PLK2Q9NYY3 685 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 UBA2Q9UBT2 640 aaPredicted RBP19.43■□□□□ 0.7
COL13A1-201ENST00000354547 OAZ3Q9UMX2 235 aa19.43■□□□□ 0.7
COL13A1-201ENST00000354547 GREB1Q4ZG55 1949 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 MTMR11A4FU01 709 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 GIPC1O14908 333 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 PENKP01210 267 aaPredicted RBP19.42■□□□□ 0.7
COL13A1-201ENST00000354547 CYBBP04839 570 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 INPP5AQ14642 412 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 RHEBL1Q8TAI7 183 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 SDR39U1Q9NRG7 319 aaPredicted RBP19.42■□□□□ 0.7
COL13A1-201ENST00000354547 SMOXQ9NWM0 555 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 ZNF225Q9UK10 706 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 BBIP1A8MTZ0 92 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 OR4F21O95013 312 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 GJB5O95377 273 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 SGSHP51688 502 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 PRSS55Q6UWB4 352 aaPredicted RBP19.42■□□□□ 0.7
COL13A1-201ENST00000354547 EPHX4Q8IUS5 362 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 CPNE9Q8IYJ1 553 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 OFCC1Q8IZS5 231 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 BBS5Q8N3I7 341 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 ASB2Q96Q27 587 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 OLA1Q9NTK5 396 aaKnown RBP19.42■□□□□ 0.7
COL13A1-201ENST00000354547 CEPT1Q9Y6K0 416 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 PATJQ8NI35 1801 aa19.42■□□□□ 0.7
COL13A1-201ENST00000354547 SNX2O60749 519 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 MC4RP32245 332 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 OXCT1P55809 520 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 NHSL2Q5HYW2 709 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 BLOC1S3Q6QNY0 202 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 LINGO1Q96FE5 620 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 PDFQ9HBH1 243 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 SCUBE2Q9NQ36 999 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 NLE1Q9NVX2 485 aaPredicted RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 C2orf81A6NN90 581 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 H3BNH8 94 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 IDO1P14902 403 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 RPL17P18621 184 aaKnown RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 CDH2P19022 906 aaPredicted RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 OGNP20774 298 aaKnown RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 FASP25445 335 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 GSK3BP49841 420 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 AAK1Q2M2I8 961 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 TRIM71Q2Q1W2 868 aaKnown RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 RALGPS2Q86X27 583 aaPredicted RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 FNDC5Q8NAU1 212 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 OR52B6Q8NGF0 335 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 OR2T11Q8NH01 316 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 TRIB3Q96RU7 358 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 KCTD14Q9BQ13 255 aaPredicted RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 HAUS8Q9BT25 410 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 DERL2Q9GZP9 239 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 PNPLA3Q9NST1 481 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 INTS7Q9NVH2 962 aaKnown RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 SEPT3Q9UH03 358 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 GPR45Q9Y5Y3 372 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 SQORQ9Y6N5 450 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 ZFC3H1O60293 1989 aaKnown RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 E5RI56 91 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 KATNA1O75449 491 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 ITGB6P18564 788 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 MAPKAPK2P49137 400 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 SUOXP51687 545 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 RPS6KA3P51812 740 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 ZNF140P52738 457 aaPredicted RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 LIPEQ05469 1076 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 RTP2Q5QGT7 225 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 PPP4R4Q6NUP7 873 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 TTC33Q6PID6 262 aaPredicted RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 ARHGAP22Q7Z5H3 698 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 FIBCD1Q8N539 461 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 FATE1Q969F0 183 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 FBXL20Q96IG2 436 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 ALG2Q9H553 416 aa19.41■□□□□ 0.7
COL13A1-201ENST00000354547 TRMT6Q9UJA5 497 aaKnown RBP19.41■□□□□ 0.7
COL13A1-201ENST00000354547 PDE4DIPQ5VU43 2346 aa19.4■□□□□ 0.7
COL13A1-201ENST00000354547 LCHNA4D1U4 455 aa19.4■□□□□ 0.7
COL13A1-201ENST00000354547 CCDC154A6NI56 674 aa19.4■□□□□ 0.7
COL13A1-201ENST00000354547 GOLGA8CPA6NN73 597 aa19.4■□□□□ 0.7
COL13A1-201ENST00000354547 INSIG1O15503 277 aa19.4■□□□□ 0.7
COL13A1-201ENST00000354547 HNRNPRO43390 633 aaKnown RBP19.4■□□□□ 0.7
COL13A1-201ENST00000354547 TYSND1Q2T9J0 566 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms