RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 MMAAQ8IVH4 418 aaKnown RBP14.81□□□□□ -0.04
COL17A1-201ENST00000353479 NOL11Q9H8H0 719 aaKnown RBP14.81□□□□□ -0.04
COL17A1-201ENST00000353479 IPPKQ9H8X2 491 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 FLRT1Q9NZU1 646 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 COLEC10Q9Y6Z7 277 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 APOA1P02647 267 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 ALPIP09923 528 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 PTGER3P43115 390 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 MS4A13Q5J8X5 152 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 C16orf62Q7Z3J2 963 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 TMEM40Q8WWA1 233 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 PAAF1Q9BRP4 392 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 MIOSQ9NXC5 875 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 NUDT4Q9NZJ9 180 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 RGS17Q9UGC6 210 aaPredicted RBP14.81□□□□□ -0.04
COL17A1-201ENST00000353479 IGKV6-21A0A0C4DH24 114 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 GRIA1P42261 906 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 ACAP2Q15057 778 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 GDPD4Q6W3E5 623 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 MPP5Q8N3R9 675 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 MS4A4AQ96JQ5 239 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 APOLD1Q96LR9 279 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 DPEP2Q9H4A9 486 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF229Q9UJW7 825 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 FGFR3P22607 806 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 MSANTD2Q6P1R3 559 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 BPIFB1Q8TDL5 484 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 DDX1Q92499 740 aaKnown RBP14.81□□□□□ -0.04
COL17A1-201ENST00000353479 PPCDCQ96CD2 204 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 TSSK3Q96PN8 268 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 TRIT1Q9H3H1 467 aaKnown RBP14.81□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF232Q9UNY5 417 aa14.81□□□□□ -0.04
COL17A1-201ENST00000353479 IRS2Q9Y4H2 1338 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 OR51F1A6NGY5 319 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 RFXANKO14593 260 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 SLC22A3O75751 556 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 TM7SF2O76062 418 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 UNC5CO95185 931 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 ESR1P03372 595 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 ANXA6P08133 673 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 NR2F1P10589 423 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 BHLHB9Q6PI77 547 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 RNF168Q8IYW5 571 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-201ENST00000353479 AHI1Q8N157 1196 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 TCF12Q99081 682 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 NPY6RQ99463 290 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 RECQL5O94762 991 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-201ENST00000353479 HSMCR30P0CW71 290 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 ZYG11AQ6WRX3 759 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 Q6ZVU0 165 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 HMGB4Q8WW32 186 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 OR2AG1Q9H205 316 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 REEP1Q9H902 201 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 MFHAS1Q9Y4C4 1052 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF780BQ9Y6R6 833 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 TCRBV7S3A2A0A539 114 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 CCDC162PA2VCL2 907 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 GSNP06396 782 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 NSG1P42857 185 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 TIGD2Q4W5G0 525 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 KIAA0930Q6ICG6 404 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-201ENST00000353479 GPR141Q7Z602 305 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 ZDHHC13Q8IUH4 622 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 HID1Q8IV36 788 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 LMO3Q8TAP4 145 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 SLC24A3Q9HC58 644 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 TRAFD1O14545 582 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-201ENST00000353479 FPGTO14772 594 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 ZNF623O75123 536 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 KRT75O95678 551 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 COPZ1P61923 177 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 C19orf60Q96EN9 201 aa14.8□□□□□ -0.04
COL17A1-201ENST00000353479 INTS7Q9NVH2 962 aaKnown RBP14.8□□□□□ -0.04
COL17A1-201ENST00000353479 CORO1CQ9ULV4 474 aaPredicted RBP14.8□□□□□ -0.04
COL17A1-201ENST00000353479 FAM20BO75063 409 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 OGNP20774 298 aaKnown RBP14.79□□□□□ -0.04
COL17A1-201ENST00000353479 DYNC1I2Q13409 638 aaKnown RBP14.79□□□□□ -0.04
COL17A1-201ENST00000353479 UBXN11Q5T124 520 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 FBXO46Q6PJ61 603 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-201ENST00000353479 DSELQ8IZU8 1212 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CRYGNQ8WXF5 182 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 PNPLA8Q9NP80 782 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 C2orf71A6NGG8 1288 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 TK2O00142 265 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 LEFTY2O00292 366 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CLEC6AQ6EIG7 209 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 ITCHQ96J02 903 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 ANGPT4Q9Y264 503 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CNOT3O75175 753 aaKnown RBP14.79□□□□□ -0.04
COL17A1-201ENST00000353479 TYRP14679 529 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 HOXA11P31270 313 aaPredicted RBP14.79□□□□□ -0.04
COL17A1-201ENST00000353479 OR4A15Q8NGL6 344 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 SPOCK2Q92563 424 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 PTPN18Q99952 460 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CLOCKO15516 846 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CNTN5O94779 1100 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CLDN9O95484 217 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 CLCQ05315 142 aa14.79□□□□□ -0.04
COL17A1-201ENST00000353479 TSNQ15631 228 aaKnown RBP14.79□□□□□ -0.04
COL17A1-201ENST00000353479 GPR135Q8IZ08 494 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms