RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 SNRPB2P08579 225 aaKnown RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 COX4I1P13073 169 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 VIPR2P41587 438 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 ARHGAP8P85298 464 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 OASLQ15646 514 aaKnown RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 PYCR2Q96C36 320 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 CFAP20Q9Y6A4 193 aaKnown RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 GHRHRQ02643 423 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 SLC9A4Q6AI14 798 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 CAPN13Q6MZZ7 669 aaPredicted RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 ABTB1Q969K4 478 aaPredicted RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 CCT7Q99832 543 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 CDH19Q9H159 772 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 DCLRE1BQ9H816 532 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 PCDH10Q9P2E7 1040 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 ZNF490Q9ULM2 529 aaPredicted RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 LRRC72A6NJI9 287 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 TGM5O43548 720 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 RRM2P31350 389 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 DSG1Q02413 1049 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 TRMT5Q32P41 509 aaKnown RBP13.62□□□□□ -0.23
SMC6-201ENST00000351948 TXNDC11Q6PKC3 985 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 UBE2E3Q969T4 207 aa13.62□□□□□ -0.23
SMC6-201ENST00000351948 AGPSO00116 658 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 SGTAO43765 313 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 TIMP1P01033 207 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ZC3H7AQ8IWR0 971 aaKnown RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 SIPA1Q96FS4 1042 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 PPP3R2Q96LZ3 170 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ELAC1Q9H777 363 aaKnown RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 DLGAP2Q9P1A6 1054 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ZNF840PA6NDX5 716 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 KCNA5P22460 613 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 NTSP30990 170 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 KCNJ2P63252 427 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 TAS1R1Q7RTX1 841 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 STK32CQ86UX6 486 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 NACC2Q96BF6 587 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 CDKN2AIPNLQ96HQ2 116 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 SGIP1Q9BQI5 828 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 SIKE1Q9BRV8 207 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 SPATS2LQ9NUQ6 558 aaKnown RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 IL36AQ9UHA7 158 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 PRKAB1Q9Y478 270 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 SLC7A4O43246 635 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 MMP20O60882 483 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 SSR2P43308 183 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ILF3Q12906 894 aaKnown RBP eCLIP13.61□□□□□ -0.23
SMC6-201ENST00000351948 CHRNA6Q15825 494 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 FAM98BQ52LJ0 330 aaKnown RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 PLEKHG4Q58EX7 1191 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 MFSD5Q6N075 450 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ARMCX6Q7L4S7 300 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 BHLHE22Q8NFJ8 381 aaPredicted RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 RDH11Q8TC12 318 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 NPAS2Q99743 824 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 PNPLA8Q9NP80 782 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 AKAP11Q9UKA4 1901 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 A0A088AWK7 358 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 KCNH1O95259 989 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 IFNA14P01570 189 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ACP5P13686 325 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 ZNF10P21506 573 aaPredicted RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 CREB5Q02930 508 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 EIF2B5Q13144 721 aaKnown RBP13.61□□□□□ -0.23
SMC6-201ENST00000351948 TJAP1Q5JTD0 557 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 PAQR3Q6TCH7 311 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 PIM3Q86V86 326 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 USP7Q93009 1102 aa13.61□□□□□ -0.23
SMC6-201ENST00000351948 PLIN3O60664 434 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 TM7SF2O76062 418 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 EN2P19622 333 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 EFNA1P20827 205 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 POLD2P49005 469 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 HCAR3P49019 387 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 OCA2Q04671 838 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GALNT2Q10471 571 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 FAM129CQ86XR2 697 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 ITFG1Q8TB96 612 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 PNPT1Q8TCS8 783 aaKnown RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 BTN2A2Q8WVV5 523 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 VPS33AQ96AX1 596 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 PANX1Q96RD7 426 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GATA5Q9BWX5 397 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 NMUR2Q9GZQ4 415 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 KLHL28Q9NXS3 571 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 EGFL7Q9UHF1 273 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 DDX60Q8IY21 1712 aaKnown RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 OR10H2O60403 315 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 FASP25445 335 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 TLX1P31314 330 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 GRIA3P42263 894 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 CAPZA2P47755 286 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 SAMD4BQ5PRF9 694 aaKnown RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 ZDHHC20Q5W0Z9 365 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 GK5Q6ZS86 529 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 OR6Y1Q8NGX8 325 aa13.6□□□□□ -0.23
SMC6-201ENST00000351948 RSPH9Q9H1X1 276 aaPredicted RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 EIF2B3Q9NR50 452 aaKnown RBP13.6□□□□□ -0.23
SMC6-201ENST00000351948 DNAJC11Q9NVH1 559 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms