RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 HDDC2Q7Z4H3 204 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 UPF1Q92900 1129 aaKnown RBP eCLIP15.93■□□□□ 0.142e-9■■■■■ 41.5
PTPN11-201ENST00000351677 TWNKQ96RR1 684 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 RSPH9Q9H1X1 276 aaPredicted RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 RBPJLQ9UBG7 517 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 FCF1Q9Y324 198 aaKnown RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 PMM2O15305 246 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 CCL16O15467 120 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 PRAMEF1O95521 474 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 RGS21Q2M5E4 152 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 CPTPQ5TA50 214 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 DEPDC4Q8N2C3 294 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF671Q8TAW3 534 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 GTF2IRD1Q9UHL9 959 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF510Q9Y2H8 683 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 GLUD1P00367 558 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 AMD1P17707 334 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 WDR4P57081 412 aaKnown RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 VARS2Q5ST30 1063 aaKnown RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 SWT1Q5T5J6 900 aaKnown RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 FUT10Q6P4F1 479 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 CHPFQ8IZ52 775 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ASZ1Q8WWH4 475 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ZHX1-C8orf76Q96EF9 292 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 ATG10Q9H0Y0 220 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 FAM124BQ9H5Z6 455 aaPredicted RBP15.93■□□□□ 0.14
PTPN11-201ENST00000351677 POLR1DQ9Y2S0 133 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 SLC28A2O43868 658 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 PPM1AP35813 382 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 CHRNA4P43681 627 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 DPYSL2Q16555 572 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 CAMKK1Q8N5S9 505 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 POMGNT2Q8NAT1 580 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 OR52L1Q8NGH7 329 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 SLC35B2Q8TB61 432 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 OR8D1Q8WZ84 308 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 EBF4Q9BQW3 602 aa15.93■□□□□ 0.14
PTPN11-201ENST00000351677 HTR7P34969 479 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SPAM1P38567 509 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 UGT2B15P54855 530 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 MPPE1Q53F39 396 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF655Q8N720 491 aaPredicted RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SIDT2Q8NBJ9 832 aaKnown RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 LRRC15Q8TF66 581 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 ESAMQ96AP7 390 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SPATA5L1Q9BVQ7 753 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 FNDC11Q9BVV2 318 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 MAF1Q9H063 256 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 OR6A2O95222 327 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 COPZ1P61923 177 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SLC39A4Q6P5W5 647 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 AMER2Q8N7J2 671 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 PSMA8Q8TAA3 256 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 B3GALT6Q96L58 329 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SOHLH2Q9NX45 425 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SPEF2Q9C093 1822 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 INSIG1O15503 277 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 FKTNO75072 461 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 HLA-DQA2P01906 255 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 TAS2R39P59534 338 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 MTAPQ13126 283 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 CNTD1Q8N815 330 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 MINDY3Q9H8M7 445 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 ZNF358Q9NW07 568 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 ZMYND8Q9ULU4 1186 aaPredicted RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 ERGIC3Q9Y282 383 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 AHCYL1O43865 530 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 RPL17P18621 184 aaKnown RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 HOXD13P35453 343 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 SLC1A2P43004 574 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 MANFP55145 182 aaKnown RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 LIPEQ05469 1076 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 NOGQ13253 232 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 UNC5BQ8IZJ1 945 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 CRISPLD1Q9H336 500 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 MRPL39Q9NYK5 338 aaKnown RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 IGSF9Q9P2J2 1179 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 ATRNL1Q5VV63 1379 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 STK16O75716 305 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 CDH4P55283 916 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 LCP2Q13094 533 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 C12orf42Q96LP6 360 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 Q96MT0 163 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 OLFM1Q99784 485 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 IMP3Q9NV31 184 aaKnown RBP15.92■□□□□ 0.14
PTPN11-201ENST00000351677 DNAJC11Q9NVH1 559 aa15.92■□□□□ 0.14
PTPN11-201ENST00000351677 OR10H2O60403 315 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 PBX3P40426 434 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 NDST2P52849 883 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 SPRYD7Q5W111 196 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 CES5AQ6NT32 575 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 BHLHB9Q6PI77 547 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.91■□□□□ 0.14
PTPN11-201ENST00000351677 OR10G6Q8NH81 332 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 EIF2B3Q9NR50 452 aaKnown RBP15.91■□□□□ 0.14
PTPN11-201ENST00000351677 GSAPA4D1B5 854 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 TULP2O00295 520 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 PIP5K1BO14986 540 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 ZW10O43264 779 aa15.91■□□□□ 0.14
PTPN11-201ENST00000351677 OR4F21O95013 312 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms