RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 MYH9P35579 1960 aaKnown RBP10.6□□□□□ -0.71
CAPN3-203ENST00000349748 C9JVG2 144 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 KELP23276 732 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 KDELR1P24390 212 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 IRF3Q14653 427 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CCNJQ5T5M9 372 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 GLYATQ6IB77 296 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CES5AQ6NT32 575 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 FAM171BQ6P995 826 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 LIPIQ6XZB0 460 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 SV2AQ7L0J3 742 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 DAW1Q8N136 415 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 UBASH3BQ8TF42 649 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PRMT6Q96LA8 375 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 FAM49AQ9H0Q0 323 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 MTMR10Q9NXD2 777 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 WRAP73Q9P2S5 460 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ERVK-18Q9QC07 812 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TRMT6Q9UJA5 497 aaKnown RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 MFHAS1Q9Y4C4 1052 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PCDHA11Q9Y5I1 949 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 METTL15A6NJ78 407 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 EFCAB9A8MZ26 197 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 H0Y626 953 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 SLC1A7O00341 560 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ARPC2O15144 300 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 MSH4O15457 936 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 OR2B3O76000 313 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 NDUFB10O96000 172 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 LDLRP01130 860 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 C2P06681 752 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ARSFP54793 590 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 SNRNP35Q16560 246 aaKnown RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 QRICH1Q2TAL8 776 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 SULT1C3Q6IMI6 304 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TAF2Q6P1X5 1199 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 DNAJC24Q6P3W2 148 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TMEM81Q6P7N7 255 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 BRAT1Q6PJG6 821 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CES3Q6UWW8 571 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PAMR1Q6UXH9 720 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF767PQ75MW2 155 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF534Q76KX8 674 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 FBXO11Q86XK2 927 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 OR8H2Q8N162 312 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ARFGAP1Q8N6T3 406 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CEP19Q96LK0 163 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 LXNQ9BS40 222 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CEP41Q9BYV8 373 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 INTS10Q9NVR2 710 aaKnown RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 REV1Q9UBZ9 1251 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ADGRE2Q9UHX3 823 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TMCC3Q9ULS5 477 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ZNF175Q9Y473 711 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CNTNAP1P78357 1384 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 APOC4-APOC2K7ER74 178 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 DFFAO00273 331 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CDK14O94921 469 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PGLSO95336 258 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 APOC2P02655 101 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 IFNA16P05015 189 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 HOXD4P09016 255 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 THRBP10828 461 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 DNAJB1P25685 340 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CNTFP26441 200 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 RFX2P48378 723 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 LAPTM5Q13571 262 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ZBTB41Q5SVQ8 909 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 IRAK1BP1Q5VVH5 260 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 APOBEC3HQ6NTF7 200 aaKnown RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 CDC42EP5Q6NZY7 148 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TMEM270Q6UE05 265 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PRSS48Q7RTY5 328 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PRSS42Q7Z5A4 293 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 STK32CQ86UX6 486 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 NLRP8Q86W28 1048 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 AQP12AQ8IXF9 295 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ABRAQ8N0Z2 381 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 PQLC3Q8N755 202 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 KCTD6Q8NC69 237 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 OR8H1Q8NGG4 311 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 FANK1Q8TC84 345 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 AKAP1Q92667 903 aaKnown RBP eCLIP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TRMT61AQ96FX7 289 aaKnown RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 ITCHQ96J02 903 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 SLC30A3Q99726 388 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 RHNO1Q9BSD3 238 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 MMP27Q9H306 513 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 TM9SF3Q9HD45 589 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 SPATA6Q9NWH7 488 aaPredicted RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 INTS6Q9UL03 887 aaKnown RBP10.59□□□□□ -0.71
CAPN3-203ENST00000349748 KLHL20Q9Y2M5 609 aa10.59□□□□□ -0.71
CAPN3-203ENST00000349748 KPNA7A9QM74 516 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 TCP10L2B9ZVM9 353 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 SDHDO14521 159 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 PPM1BO75688 479 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CYP7B1O75881 506 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CYBBP04839 570 aa10.58□□□□□ -0.72
CAPN3-203ENST00000349748 CCNYL3P0C7X3 344 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms