RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 LINGO3P0C6S8 592 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 TMIGD3P0DMS9 266 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 UCHL3P15374 230 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 GP5P40197 560 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 THOP1P52888 689 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 SNU13P55769 128 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 RGS8P57771 180 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 XIAPP98170 497 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 MPEG1Q2M385 716 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 MMEL1Q495T6 779 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 STRIP1Q5VSL9 837 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 RAP1GAP2Q684P5 730 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 GPR153Q6NV75 609 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 CMTR2Q8IYT2 770 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 MSANTD3Q96H12 275 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 TRIB1Q96RU8 372 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 TMLHEQ9NVH6 421 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 DRG1Q9Y295 367 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 SPINT1O43278 529 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 PRKAB2O43741 272 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 RFPL3O75679 317 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 KLHL18O94889 574 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ESRRBO95718 433 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ABOP16442 354 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 COILP38432 576 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 RBM34P42696 430 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 SERPINB8P50452 374 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 MBTD1Q05BQ5 628 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 NKG7Q16617 165 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 MEP1AQ16819 746 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 HADHQ16836 314 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 HABP4Q5JVS0 413 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 RNFT1Q5M7Z0 435 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 RTL6Q6ICC9 239 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 CLNKQ7Z7G1 428 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 FAM228AQ86W67 206 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 IRF2BP1Q8IU81 584 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 CAMK1DQ8IU85 385 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ZNF687Q8N1G0 1237 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 GANCQ8TET4 914 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 SDR42E1Q8WUS8 393 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ZNF317Q96PQ6 595 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 PAFAH2Q99487 392 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ACTRT3Q9BYD9 372 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ATP13A2Q9NQ11 1180 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.95□□□□□ -1.46
RFC1-201ENST00000349703 BARHL2Q9NY43 387 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ACTR3BQ9P1U1 418 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.95□□□□□ -1.46
RFC1-201ENST00000349703 PCDHA12Q9UN75 941 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 SNX7Q9UNH6 387 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 RGPD1P0DJD0 1748 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 CCDC162PA2VCL2 907 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 JUPP14923 745 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 YBX3P16989 372 aaKnown RBP eCLIP5.95□□□□□ -1.464e-6■■■□□ 16.7
RFC1-201ENST00000349703 IFI35P80217 286 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 SMAD4Q13485 552 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 GRM4Q14833 912 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 ODF1Q14990 250 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 TBRG1Q3YBR2 411 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 DUPD1Q68J44 220 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 SP5Q6BEB4 398 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 SCARA5Q6ZMJ2 495 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 KRT77Q7Z794 578 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 KIF18BQ86Y91 864 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 MEIOBQ8N635 442 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 NIPA2Q8N8Q9 360 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 FBXO25Q8TCJ0 367 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 TBCKQ8TEA7 893 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 HPS1Q92902 700 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 INTS12Q96CB8 462 aaKnown RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 LRRC39Q96DD0 335 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 HPDLQ96IR7 371 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 CYTH2Q99418 400 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 POLR3CQ9BUI4 534 aaPredicted RBP5.95□□□□□ -1.46
RFC1-201ENST00000349703 NYXQ9GZU5 481 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 SEMA6BQ9H3T3 888 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 RAB20Q9NX57 234 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 CYTH4Q9UIA0 394 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 PLEKHM1Q9Y4G2 1056 aa5.95□□□□□ -1.46
RFC1-201ENST00000349703 PP2D1A8MPX8 630 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 PDE5AO76074 875 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 RGS11O94810 467 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 CA3P07451 260 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 KRT3P12035 628 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 GABRA5P31644 462 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 SFTPDP35247 375 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 ARSEP51690 589 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 MYBPHQ13203 477 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 KNOP1Q1ED39 458 aaKnown RBP5.94□□□□□ -1.46
RFC1-201ENST00000349703 ZBTB37Q5TC79 503 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 C11orf63Q6NUN7 778 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 PACS1Q6VY07 963 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 B3GNT6Q6ZMB0 384 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 SLC29A4Q7RTT9 530 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 RASAL3Q86YV0 1011 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 MCATQ8IVS2 390 aaKnown RBP5.94□□□□□ -1.46
RFC1-201ENST00000349703 REPS2Q8NFH8 660 aa5.94□□□□□ -1.46
RFC1-201ENST00000349703 TBC1D16Q8TBP0 767 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms