RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 CASD1Q96PB1 797 aa15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 CWH43Q9H720 699 aa15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 MARCH5Q9NX47 278 aa15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 TRMT6Q9UJA5 497 aaKnown RBP15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 AGO1Q9UL18 857 aaKnown RBP15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 DMTF1Q9Y222 760 aa15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 MED16Q9Y2X0 877 aa15.37■□□□□ 0.05
TNFSF13-202ENST00000349228 NME4O00746 187 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 ENPP3O14638 875 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CYBBP04839 570 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 GPIP06744 558 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 RHOCP08134 193 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CAPN3P20807 821 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 GRIA3P42263 894 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 KCNK10P57789 538 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 VPS26BQ4G0F5 336 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 IYDQ6PHW0 289 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CYP2R1Q6VVX0 501 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 B3GNT6Q6ZMB0 384 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PRR23BQ6ZRT6 265 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CARM1Q86X55 608 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CAMK1DQ8IU85 385 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 MFSD2AQ8NA29 543 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 SNRNP27Q8WVK2 155 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 DTNBP1Q96EV8 351 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 NSUN5Q96P11 429 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PRPF18Q99633 342 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 GPR21Q99679 349 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 TTPALQ9BTX7 342 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 MRPL9Q9BYD2 267 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 NACA2Q9H009 215 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CRISPLD1Q9H336 500 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 AIG1Q9NVV5 245 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 APPL1Q9UKG1 709 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 FAM50BQ9Y247 325 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 A0A1B0GVM2 712 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 C7orf72A4D263 438 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 KLHL33A6NCF5 533 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PPP6CO00743 305 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PRLP01236 227 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 LINC00032P0C843 101 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 UMPSP11172 480 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 SELPP16109 830 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PSMA4P25789 261 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PTGER3P43115 390 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 SLC11A1P49279 550 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 FOXA1P55317 472 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CYTH1Q15438 398 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 TSNQ15631 228 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 AASDHQ4L235 1098 aaPredicted RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PDCD4Q53EL6 469 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 XKR7Q5GH72 579 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 HECTD3Q5T447 861 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 AP1ARQ63HQ0 302 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 GPSM1Q86YR5 675 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 MDGA1Q8NFP4 955 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 GIPC2Q8TF65 315 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 CANT1Q8WVQ1 401 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 KCNJ9Q92806 393 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 BIRC8Q96P09 236 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 BRINP2Q9C0B6 783 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 SEMA6AQ9H2E6 1030 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 NOL11Q9H8H0 719 aaKnown RBP15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 SLC52A3Q9NQ40 469 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 PNPLA3Q9NST1 481 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 ZIM2Q9NZV7 527 aa15.36■□□□□ 0.05
TNFSF13-202ENST00000349228 DHRS12A0PJE2 317 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 LRRC14BA6NHZ5 514 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 ANKRD66B4E2M5 251 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 BTN3A1O00481 513 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 SNX2O60749 519 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 PEX14O75381 377 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 H6PDO95479 791 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 ESR1P03372 595 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 F11P03951 625 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 SLC6A2P23975 617 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 TUBA4AP68366 448 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 NRF1Q16656 503 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 NADK2Q4G0N4 442 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 MTX3Q5HYI7 312 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 HMBOX1Q6NT76 420 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 RSPO2Q6UXX9 243 aaPredicted RBP15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 RBM44Q6ZP01 1051 aaKnown RBP15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 LRRC8DQ7L1W4 858 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 SPNS2Q8IVW8 549 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 HM13Q8TCT9 377 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 PDLIM5Q96HC4 596 aaKnown RBP15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 HGH1Q9BTY7 390 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 ANKRD60Q9BZ19 345 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 SEMA4BQ9NPR2 832 aaPredicted RBP15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 LEF1Q9UJU2 399 aaPredicted RBP15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 PCTPQ9UKL6 214 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 LRFN2Q9ULH4 789 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 PCDHA9Q9Y5H5 950 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 RAI2Q9Y5P3 530 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 TTC3P53804 2025 aa15.35■□□□□ 0.05
TNFSF13-202ENST00000349228 ZNF839A8K0R7 811 aa15.34■□□□□ 0.05
TNFSF13-202ENST00000349228 FXYD1O00168 92 aa15.34■□□□□ 0.05
TNFSF13-202ENST00000349228 VILLO15195 856 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms