RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SEC14L1Q92503 715 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 MRPL45Q9BRJ2 306 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CCDC167Q9P0B6 97 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 MSRAQ9UJ68 235 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ARHGEF28Q8N1W1 1705 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ASTN2O75129 1339 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 SLC22A1O15245 554 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CTSEP14091 401 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 RPA4Q13156 261 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF697Q5TEC3 545 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 BPHLQ86WA6 291 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GPSM1Q86YR5 675 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 KATNAL2Q8IYT4 538 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 OR56A4Q8NGH8 313 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CXorf40AQ8TE69 158 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 RFT1Q96AA3 541 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ISOC1Q96CN7 298 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 MIR1-1HGQ9H1L0 117 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 PNPLA8Q9NP80 782 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 UFSP2Q9NUQ7 469 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 EXD2Q9NVH0 621 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ZSCAN32Q9NX65 697 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ACTR10Q9NZ32 417 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM237BA0A1B0GVD1 139 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 PDE2AO00408 941 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ZBTB14O43829 449 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 SERPINA1P01009 418 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GOT1P17174 413 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CTPS1P17812 591 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 UQCRC1P31930 480 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 PRMT2P55345 433 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GALNT1Q10472 559 aaPredicted RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF181Q2M3W8 571 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CES5AQ6NT32 575 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CHADLQ6NUI6 762 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 CYP20A1Q6UW02 462 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 FIBCD1Q8N539 461 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 NAT16Q8N8M0 369 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF540Q8NDQ6 660 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 TMPRSS4Q9NRS4 437 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 DUSP12Q9UNI6 340 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ST14Q9Y5Y6 855 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 RGSL1A5PLK6 1076 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 PAHP00439 452 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 NFKB1P19838 968 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 PKLRP30613 574 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 TIE1P35590 1138 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 FLT3LGP49771 235 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 UBAP2LQ14157 1087 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 RRP1BQ14684 758 aaKnown RBP11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 P2RY8Q86VZ1 359 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 FAM228AQ86W67 206 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 ELMO1Q92556 727 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 LENG9Q96B70 501 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 DNAJC19Q96DA6 116 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 Q96MT0 163 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GPSM3Q9Y4H4 160 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 SPO11Q9Y5K1 396 aa11.04□□□□□ -0.64
SMARCE1-202ENST00000348513 GRK4P32298 578 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 INHBEP58166 350 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PRKG2Q13237 762 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PFKFB4Q16877 469 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 MIIPQ5JXC2 388 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SPATA6LQ8N4H0 392 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 C18orf25Q96B23 403 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 UROC1Q96N76 676 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TBCDQ9BTW9 1192 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ASB8Q9H765 288 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 AHSPQ9NZD4 102 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNHIT2Q9UHR6 403 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 HSPB11Q9Y547 144 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CYP3A7-CYP3A51PA0A087WV96 503 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TTLL8A6PVC2 850 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 YDJCA8MPS7 323 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 INPP4BO15327 924 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 GNAO1P09471 354 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CYP3A7P24462 503 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 POLR2LP62875 67 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 TARBP2Q15633 366 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 CDKL4Q5MAI5 379 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 FNBP1LQ5T0N5 605 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 RAET1GQ6H3X3 334 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 DCP2Q8IU60 420 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ZDHHC13Q8IUH4 622 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SYNPOQ8N3V7 929 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 GPN1Q9HCN4 374 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 GRHL1Q9NZI5 618 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 SLC9A8Q9Y2E8 581 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 WNT7AO00755 349 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 FEN1P39748 380 aaKnown RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 RGS6P49758 472 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 ZNF143P52747 638 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PPP1R26Q5T8A7 1209 aaPredicted RBP11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PLPP4Q5VZY2 271 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
SMARCE1-202ENST00000348513 DPPA2Q7Z7J5 298 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms